Gene : Gorai.001G133800 G. raimondii v2.1
Defline:  (1 of 2) PTHR31956:SF10 - NON-SPECIFIC PHOSPHOLIPASE C2 Genomic Order:  1338
Name:  ? Gorai.001G133800 Secondary Identifier:  ? PAC:26820427
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii LIPASYN-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.001G133800 0.5kb upstream 0.5kb upstream 5019 true Chr01: 17209268-17214286 Gossypium raimondii
Gorai.001G133800 0.5kb upstream 0.5kb upstream 500 false Chr01: 17209268-17209767 Gossypium raimondii
Gorai.001G133800 0.5kb downstream 0.5kb downstream 5019 true Chr01: 17209768-17214786 Gossypium raimondii
Gorai.001G133800 0.5kb downstream 0.5kb downstream 500 false Chr01: 17214287-17214786 Gossypium raimondii
Gorai.001G133800 1.0kb upstream 1.0kb upstream 5519 true Chr01: 17208768-17214286 Gossypium raimondii
Gorai.001G133800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 17208768-17209767 Gossypium raimondii
Gorai.001G133800 1.0kb downstream 1.0kb downstream 5519 true Chr01: 17209768-17215286 Gossypium raimondii
Gorai.001G133800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 17214287-17215286 Gossypium raimondii
Gorai.001G133800 2.0kb upstream 2.0kb upstream 6519 true Chr01: 17207768-17214286 Gossypium raimondii
Gorai.001G133800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 17207768-17209767 Gossypium raimondii
Gorai.001G133800 2.0kb downstream 2.0kb downstream 6519 true Chr01: 17209768-17216286 Gossypium raimondii
Gorai.001G133800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 17214287-17216286 Gossypium raimondii
Gorai.001G133800 5.0kb upstream 5.0kb upstream 9519 true Chr01: 17204768-17214286 Gossypium raimondii
Gorai.001G133800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 17204768-17209767 Gossypium raimondii
Gorai.001G133800 5.0kb downstream 5.0kb downstream 9519 true Chr01: 17209768-17219286 Gossypium raimondii
Gorai.001G133800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 17214287-17219286 Gossypium raimondii
Gorai.001G133800 10.0kb upstream 10.0kb upstream 14519 true Chr01: 17199768-17214286 Gossypium raimondii
Gorai.001G133800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 17199768-17209767 Gossypium raimondii
Gorai.001G133800 10.0kb downstream 10.0kb downstream 14519 true Chr01: 17209768-17224286 Gossypium raimondii
Gorai.001G133800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 17214287-17224286 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833942 5264 Brassicales-Malvales View MSA
124339111 5266 SBM View MSA
124245748 5268 Malvidae View MSA
124069439 5270 Rosid View MSA
123747870 5271 Pentapetalae View MSA
122794639 5272 Eudicot View MSA
122048233 5273 Angiosperm View MSA
121345811 5274 Embryophyte View MSA
123380272 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain