Gene : Potri.007G013900 P. trichocarpa v3.0
Defline:  (1 of 2) 4.2.1.47 - GDP-mannose 4,6-dehydratase / Guanosine diphosphomannose oxidoreductase Genomic Order:  139
Name:  ? Potri.007G013900 Secondary Identifier:  ? PAC:27015092
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-66 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.007G013900 0.5kb upstream 0.5kb upstream 2037 true Chr07: 1046357-1048393 Populus trichocarpa
Potri.007G013900 0.5kb upstream 0.5kb upstream 500 false Chr07: 1046357-1046856 Populus trichocarpa
Potri.007G013900 0.5kb downstream 0.5kb downstream 2037 true Chr07: 1046857-1048893 Populus trichocarpa
Potri.007G013900 0.5kb downstream 0.5kb downstream 500 false Chr07: 1048394-1048893 Populus trichocarpa
Potri.007G013900 1.0kb upstream 1.0kb upstream 2537 true Chr07: 1045857-1048393 Populus trichocarpa
Potri.007G013900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 1045857-1046856 Populus trichocarpa
Potri.007G013900 1.0kb downstream 1.0kb downstream 2537 true Chr07: 1046857-1049393 Populus trichocarpa
Potri.007G013900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 1048394-1049393 Populus trichocarpa
Potri.007G013900 2.0kb upstream 2.0kb upstream 3537 true Chr07: 1044857-1048393 Populus trichocarpa
Potri.007G013900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 1044857-1046856 Populus trichocarpa
Potri.007G013900 2.0kb downstream 2.0kb downstream 3537 true Chr07: 1046857-1050393 Populus trichocarpa
Potri.007G013900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 1048394-1050393 Populus trichocarpa
Potri.007G013900 5.0kb upstream 5.0kb upstream 6537 true Chr07: 1041857-1048393 Populus trichocarpa
Potri.007G013900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 1041857-1046856 Populus trichocarpa
Potri.007G013900 5.0kb downstream 5.0kb downstream 6537 true Chr07: 1046857-1053393 Populus trichocarpa
Potri.007G013900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 1048394-1053393 Populus trichocarpa
Potri.007G013900 10.0kb upstream 10.0kb upstream 11537 true Chr07: 1036857-1048393 Populus trichocarpa
Potri.007G013900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 1036857-1046856 Populus trichocarpa
Potri.007G013900 10.0kb downstream 10.0kb downstream 11537 true Chr07: 1046857-1058393 Populus trichocarpa
Potri.007G013900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 1048394-1058393 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.049        
cufflinks 109.598     High High
cufflinks 58.768     High  
cufflinks 48.459     High  
cufflinks 35.851     High Low
cufflinks 52.453     High  
cufflinks 61.034     High  
cufflinks 40.448     High  
cufflinks 70.722     High  
cufflinks 51.517     High  
cufflinks 102.712     High High
cufflinks 114.345     High High
cufflinks 57.501     High  
cufflinks 119.949     High High
cufflinks 53.311     High  
cufflinks 87.799     High  
cufflinks 85.59     High  
cufflinks 63.083     High  
cufflinks 100.933     High  
cufflinks 166.254     High High
cufflinks 47.758     High  
cufflinks 36.614     High Low
cufflinks 18.628     High Low
cufflinks 51.138     High  
cufflinks 62.02     High  
cufflinks 5.737       Low
cufflinks 8.51        
cufflinks 7.679        
cufflinks 18.227        
cufflinks 7.909        

0 Strain