Protein : Potri.006G031900.4 P. trichocarpa v3.0

Secondary Identifier:  PAC:27007477 Organism Name:  Populus trichocarpa
Length:  1487   Name:  Potri.006G031900.4
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Proteins

11 Protein Domains

DB identifier Type Name
IPR012340 Domain Nucleic acid-binding, OB-fold
IPR012337 Domain Ribonuclease H-like domain
IPR003029 Domain S1 domain
IPR027999 Domain Death-like domain of Spt6
IPR017072 Family Transcription elongation factor Spt6
IPR028231 Domain Transcription elongation factor Spt6, YqgF domain
IPR028088 Domain Helix-turn-helix DNA-binding domain of Spt6
IPR000980 Domain SH2 domain
IPR010994 Domain RuvA domain 2-like
IPR022967 Domain RNA-binding domain, S1
IPR028083 Domain Spt6 acidic, N-terminal domain
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Potri.006G031900.4_CDS 4464   Chr06: 2153837-2161528 Populus trichocarpa

34 Ontology Annotations

Ontology Term Db Gene/Protein Name
IPR012337 InterPro Potri.006G031900.4
IPR012340 InterPro Potri.006G031900.4
IPR017072 InterPro Potri.006G031900.4
IPR022967 InterPro Potri.006G031900.4
GO:0032784 GO Potri.006G031900.4
IPR000980 InterPro Potri.006G031900.4
IPR003029 InterPro Potri.006G031900.4
IPR010994 InterPro Potri.006G031900.4
K11292 KEGG Potri.006G031900.4
PTHR10145 PANTHER Potri.006G031900.4
PTHR10145:SF6 PANTHER Potri.006G031900.4
PF14632 PFAM Potri.006G031900.4
IPR027999 InterPro Potri.006G031900.4
IPR028083 InterPro Potri.006G031900.4
IPR028088 InterPro Potri.006G031900.4
IPR028231 InterPro Potri.006G031900.4
PF14878 PFAM Potri.006G031900.4
PIRSF036947 PIRSF Potri.006G031900.4
PS50126 PROFILE Potri.006G031900.4
SM00316 SMART Potri.006G031900.4
PF14633 PFAM Potri.006G031900.4
PF14635 PFAM Potri.006G031900.4
PF14639 PFAM Potri.006G031900.4
PF14641 PFAM Potri.006G031900.4
SSF55550 SSF Potri.006G031900.4
SSF158832 SSF Potri.006G031900.4
SSF47781 SSF Potri.006G031900.4
SSF50249 SSF Potri.006G031900.4
SSF53098 SSF Potri.006G031900.4
G3DSA:3.30.505.10 GENE3D Potri.006G031900.4

0 Pathway Components

0 Pathways