Gene : Potri.018G044100 P. trichocarpa v3.0
Defline:  (1 of 2) 1.13.11.70 - All-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase / Carotenoid cleavage dioxygenase 8 Genomic Order:  441
Name:  ? Potri.018G044100 Secondary Identifier:  ? PAC:27009254
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7101 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.018G044100 0.5kb upstream 0.5kb upstream 4453 true Chr18: 3993622-3998074 Populus trichocarpa
Potri.018G044100 0.5kb upstream 0.5kb upstream 500 false Chr18: 3993622-3994121 Populus trichocarpa
Potri.018G044100 0.5kb downstream 0.5kb downstream 4453 true Chr18: 3994122-3998574 Populus trichocarpa
Potri.018G044100 0.5kb downstream 0.5kb downstream 500 false Chr18: 3998075-3998574 Populus trichocarpa
Potri.018G044100 1.0kb upstream 1.0kb upstream 4953 true Chr18: 3993122-3998074 Populus trichocarpa
Potri.018G044100 1.0kb upstream 1.0kb upstream 1000 false Chr18: 3993122-3994121 Populus trichocarpa
Potri.018G044100 1.0kb downstream 1.0kb downstream 4953 true Chr18: 3994122-3999074 Populus trichocarpa
Potri.018G044100 1.0kb downstream 1.0kb downstream 1000 false Chr18: 3998075-3999074 Populus trichocarpa
Potri.018G044100 2.0kb upstream 2.0kb upstream 5953 true Chr18: 3992122-3998074 Populus trichocarpa
Potri.018G044100 2.0kb upstream 2.0kb upstream 2000 false Chr18: 3992122-3994121 Populus trichocarpa
Potri.018G044100 2.0kb downstream 2.0kb downstream 5953 true Chr18: 3994122-4000074 Populus trichocarpa
Potri.018G044100 2.0kb downstream 2.0kb downstream 2000 false Chr18: 3998075-4000074 Populus trichocarpa
Potri.018G044100 5.0kb upstream 5.0kb upstream 8953 true Chr18: 3989122-3998074 Populus trichocarpa
Potri.018G044100 5.0kb upstream 5.0kb upstream 5000 false Chr18: 3989122-3994121 Populus trichocarpa
Potri.018G044100 5.0kb downstream 5.0kb downstream 8953 true Chr18: 3994122-4003074 Populus trichocarpa
Potri.018G044100 5.0kb downstream 5.0kb downstream 5000 false Chr18: 3998075-4003074 Populus trichocarpa
Potri.018G044100 10.0kb upstream 10.0kb upstream 13953 true Chr18: 3984122-3998074 Populus trichocarpa
Potri.018G044100 10.0kb upstream 10.0kb upstream 10000 false Chr18: 3984122-3994121 Populus trichocarpa
Potri.018G044100 10.0kb downstream 10.0kb downstream 13953 true Chr18: 3994122-4008074 Populus trichocarpa
Potri.018G044100 10.0kb downstream 10.0kb downstream 10000 false Chr18: 3998075-4008074 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.03     Low  
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.03     Low  
cufflinks 0.005     Low  
cufflinks 0.017     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.236       High
cufflinks 0.027     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low Low
cufflinks 0.03     Low  
cufflinks 3.181       High
cufflinks 0.023     Low  
cufflinks 0.002     Low Low
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.562       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain