Gene : Potri.012G074800 P. trichocarpa v3.0
Defline:  (1 of 2) K05236 - coatomer protein complex, subunit alpha (xenin) (COPA) Genomic Order:  748
Name:  ? Potri.012G074800 Secondary Identifier:  ? PAC:27049655
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.012G074800 0.5kb upstream 0.5kb upstream 6287 true Chr12: 9993593-9999879 Populus trichocarpa
Potri.012G074800 0.5kb upstream 0.5kb upstream 500 false Chr12: 9993593-9994092 Populus trichocarpa
Potri.012G074800 0.5kb downstream 0.5kb downstream 6287 true Chr12: 9994093-10000379 Populus trichocarpa
Potri.012G074800 0.5kb downstream 0.5kb downstream 500 false Chr12: 9999880-10000379 Populus trichocarpa
Potri.012G074800 1.0kb upstream 1.0kb upstream 6787 true Chr12: 9993093-9999879 Populus trichocarpa
Potri.012G074800 1.0kb upstream 1.0kb upstream 1000 false Chr12: 9993093-9994092 Populus trichocarpa
Potri.012G074800 1.0kb downstream 1.0kb downstream 6787 true Chr12: 9994093-10000879 Populus trichocarpa
Potri.012G074800 1.0kb downstream 1.0kb downstream 1000 false Chr12: 9999880-10000879 Populus trichocarpa
Potri.012G074800 2.0kb upstream 2.0kb upstream 7787 true Chr12: 9992093-9999879 Populus trichocarpa
Potri.012G074800 2.0kb upstream 2.0kb upstream 2000 false Chr12: 9992093-9994092 Populus trichocarpa
Potri.012G074800 2.0kb downstream 2.0kb downstream 7787 true Chr12: 9994093-10001879 Populus trichocarpa
Potri.012G074800 2.0kb downstream 2.0kb downstream 2000 false Chr12: 9999880-10001879 Populus trichocarpa
Potri.012G074800 5.0kb upstream 5.0kb upstream 10787 true Chr12: 9989093-9999879 Populus trichocarpa
Potri.012G074800 5.0kb upstream 5.0kb upstream 5000 false Chr12: 9989093-9994092 Populus trichocarpa
Potri.012G074800 5.0kb downstream 5.0kb downstream 10787 true Chr12: 9994093-10004879 Populus trichocarpa
Potri.012G074800 5.0kb downstream 5.0kb downstream 5000 false Chr12: 9999880-10004879 Populus trichocarpa
Potri.012G074800 10.0kb upstream 10.0kb upstream 15787 true Chr12: 9984093-9999879 Populus trichocarpa
Potri.012G074800 10.0kb upstream 10.0kb upstream 10000 false Chr12: 9984093-9994092 Populus trichocarpa
Potri.012G074800 10.0kb downstream 10.0kb downstream 15787 true Chr12: 9994093-10009879 Populus trichocarpa
Potri.012G074800 10.0kb downstream 10.0kb downstream 10000 false Chr12: 9999880-10009879 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.167     High  
cufflinks 22.253     High  
cufflinks 25.517     High  
cufflinks 14.12     High Low
cufflinks 16.511     High Low
cufflinks 21.803     High  
cufflinks 35.58     High High
cufflinks 18.975     High  
cufflinks 25.165     High  
cufflinks 28.599     High  
cufflinks 34.662     High High
cufflinks 24.735     High  
cufflinks 35.645     High High
cufflinks 18.465     High Low
cufflinks 18.44     High Low
cufflinks 37.394     High High
cufflinks 14.902     High Low
cufflinks 24.254     High  
cufflinks 29.307     High  
cufflinks 36.021     High High
cufflinks 23.78     High  
cufflinks 27.709     High  
cufflinks 25.919     High  
cufflinks 29.97     High  
cufflinks 31.022     High Low
cufflinks 33.633     High Low
cufflinks 37.927     High  
cufflinks 40.936     High  
cufflinks 39.074     High  
cufflinks 40.556     High  

0 Strain