Gene : Potri.011G122200 P. trichocarpa v3.0
Defline:  (1 of 2) K14820 - ribosome biogenesis protein BRX1 (BRX1, BRIX1) Genomic Order:  1222
Name:  ? Potri.011G122200 Secondary Identifier:  ? PAC:27002506
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.011G122200 0.5kb upstream 0.5kb upstream 5848 true Chr11: 14730490-14736337 Populus trichocarpa
Potri.011G122200 0.5kb upstream 0.5kb upstream 500 false Chr11: 14735838-14736337 Populus trichocarpa
Potri.011G122200 0.5kb downstream 0.5kb downstream 5848 true Chr11: 14729990-14735837 Populus trichocarpa
Potri.011G122200 0.5kb downstream 0.5kb downstream 500 false Chr11: 14729990-14730489 Populus trichocarpa
Potri.011G122200 1.0kb upstream 1.0kb upstream 6348 true Chr11: 14730490-14736837 Populus trichocarpa
Potri.011G122200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 14735838-14736837 Populus trichocarpa
Potri.011G122200 1.0kb downstream 1.0kb downstream 6348 true Chr11: 14729490-14735837 Populus trichocarpa
Potri.011G122200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 14729490-14730489 Populus trichocarpa
Potri.011G122200 2.0kb upstream 2.0kb upstream 7348 true Chr11: 14730490-14737837 Populus trichocarpa
Potri.011G122200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 14735838-14737837 Populus trichocarpa
Potri.011G122200 2.0kb downstream 2.0kb downstream 7348 true Chr11: 14728490-14735837 Populus trichocarpa
Potri.011G122200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 14728490-14730489 Populus trichocarpa
Potri.011G122200 5.0kb upstream 5.0kb upstream 10348 true Chr11: 14730490-14740837 Populus trichocarpa
Potri.011G122200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 14735838-14740837 Populus trichocarpa
Potri.011G122200 5.0kb downstream 5.0kb downstream 10348 true Chr11: 14725490-14735837 Populus trichocarpa
Potri.011G122200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 14725490-14730489 Populus trichocarpa
Potri.011G122200 10.0kb upstream 10.0kb upstream 15348 true Chr11: 14730490-14745837 Populus trichocarpa
Potri.011G122200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 14735838-14745837 Populus trichocarpa
Potri.011G122200 10.0kb downstream 10.0kb downstream 15348 true Chr11: 14720490-14735837 Populus trichocarpa
Potri.011G122200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 14720490-14730489 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.264       Low
cufflinks 2.687        
cufflinks 3.996       High
cufflinks 1.634        
cufflinks 1.298       Low
cufflinks 1.473        
cufflinks 2.548        
cufflinks 2.517        
cufflinks 3.168        
cufflinks 2.742        
cufflinks 4.002       High
cufflinks 1.618        
cufflinks 1.015       Low
cufflinks 1.263       Low
cufflinks 5.611       High
cufflinks 2.495        
cufflinks 2.603        
cufflinks 3.469        
cufflinks 2.173        
cufflinks 1.096       Low
cufflinks 5.028       High
cufflinks 3.08        
cufflinks 3.187        
cufflinks 2.254        
cufflinks 4.942        
cufflinks 4.292        
cufflinks 5.071        
cufflinks 11.978        
cufflinks 13.743       High
cufflinks 5.445        

0 Strain