Gene : Potri.010G116400 P. trichocarpa v3.0
Defline:  (1 of 2) K12200 - programmed cell death 6-interacting protein (PDCD6IP, ALIX, RIM20) Genomic Order:  1164
Name:  ? Potri.010G116400 Secondary Identifier:  ? PAC:26979245
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.010G116400 0.5kb upstream 0.5kb upstream 9279 true Chr10: 13436495-13445773 Populus trichocarpa
Potri.010G116400 0.5kb upstream 0.5kb upstream 500 false Chr10: 13445274-13445773 Populus trichocarpa
Potri.010G116400 0.5kb downstream 0.5kb downstream 9279 true Chr10: 13435995-13445273 Populus trichocarpa
Potri.010G116400 0.5kb downstream 0.5kb downstream 500 false Chr10: 13435995-13436494 Populus trichocarpa
Potri.010G116400 1.0kb upstream 1.0kb upstream 9779 true Chr10: 13436495-13446273 Populus trichocarpa
Potri.010G116400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 13445274-13446273 Populus trichocarpa
Potri.010G116400 1.0kb downstream 1.0kb downstream 9779 true Chr10: 13435495-13445273 Populus trichocarpa
Potri.010G116400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 13435495-13436494 Populus trichocarpa
Potri.010G116400 2.0kb upstream 2.0kb upstream 10779 true Chr10: 13436495-13447273 Populus trichocarpa
Potri.010G116400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 13445274-13447273 Populus trichocarpa
Potri.010G116400 2.0kb downstream 2.0kb downstream 10779 true Chr10: 13434495-13445273 Populus trichocarpa
Potri.010G116400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 13434495-13436494 Populus trichocarpa
Potri.010G116400 5.0kb upstream 5.0kb upstream 13779 true Chr10: 13436495-13450273 Populus trichocarpa
Potri.010G116400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 13445274-13450273 Populus trichocarpa
Potri.010G116400 5.0kb downstream 5.0kb downstream 13779 true Chr10: 13431495-13445273 Populus trichocarpa
Potri.010G116400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 13431495-13436494 Populus trichocarpa
Potri.010G116400 10.0kb upstream 10.0kb upstream 18779 true Chr10: 13436495-13455273 Populus trichocarpa
Potri.010G116400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 13445274-13455273 Populus trichocarpa
Potri.010G116400 10.0kb downstream 10.0kb downstream 18779 true Chr10: 13426495-13445273 Populus trichocarpa
Potri.010G116400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 13426495-13436494 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.898        
cufflinks 1.02        
cufflinks 1.689        
cufflinks 0.923       Low
cufflinks 0.862       Low
cufflinks 0.877       Low
cufflinks 2.038       High
cufflinks 1.696        
cufflinks 1.878        
cufflinks 1.006        
cufflinks 1.266        
cufflinks 1.363        
cufflinks 2.698       High
cufflinks 1.165        
cufflinks 0.695       Low
cufflinks 1.222        
cufflinks 1.774        
cufflinks 1.063        
cufflinks 1.465        
cufflinks 0.716       Low
cufflinks 1.764        
cufflinks 1.94        
cufflinks 1.409        
cufflinks 2.148       High
cufflinks 16.626        
cufflinks 15.256        
cufflinks 14.34        
cufflinks 11.597        
cufflinks 12.274        
cufflinks 16.378        

0 Strain