Gene : Potri.010G071000 P. trichocarpa v3.0
Defline:  (1 of 6) K00025 - malate dehydrogenase (MDH1) Genomic Order:  710
Name:  ? Potri.010G071000 Secondary Identifier:  ? PAC:26980377
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7115 Populus trichocarpa pathologic  
Ptrichocarpa PWY-561 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5464 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5690 Populus trichocarpa pathologic  
Ptrichocarpa GLYOXYLATE-BYPASS Populus trichocarpa pathologic  
Ptrichocarpa PWY66-399 Populus trichocarpa pathologic  
Ptrichocarpa GLUCONEO-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.010G071000 0.5kb upstream 0.5kb upstream 3950 true Chr10: 9778604-9782553 Populus trichocarpa
Potri.010G071000 0.5kb upstream 0.5kb upstream 500 false Chr10: 9778604-9779103 Populus trichocarpa
Potri.010G071000 0.5kb downstream 0.5kb downstream 3950 true Chr10: 9779104-9783053 Populus trichocarpa
Potri.010G071000 0.5kb downstream 0.5kb downstream 500 false Chr10: 9782554-9783053 Populus trichocarpa
Potri.010G071000 1.0kb upstream 1.0kb upstream 4450 true Chr10: 9778104-9782553 Populus trichocarpa
Potri.010G071000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 9778104-9779103 Populus trichocarpa
Potri.010G071000 1.0kb downstream 1.0kb downstream 4450 true Chr10: 9779104-9783553 Populus trichocarpa
Potri.010G071000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 9782554-9783553 Populus trichocarpa
Potri.010G071000 2.0kb upstream 2.0kb upstream 5450 true Chr10: 9777104-9782553 Populus trichocarpa
Potri.010G071000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 9777104-9779103 Populus trichocarpa
Potri.010G071000 2.0kb downstream 2.0kb downstream 5450 true Chr10: 9779104-9784553 Populus trichocarpa
Potri.010G071000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 9782554-9784553 Populus trichocarpa
Potri.010G071000 5.0kb upstream 5.0kb upstream 8450 true Chr10: 9774104-9782553 Populus trichocarpa
Potri.010G071000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 9774104-9779103 Populus trichocarpa
Potri.010G071000 5.0kb downstream 5.0kb downstream 8450 true Chr10: 9779104-9787553 Populus trichocarpa
Potri.010G071000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 9782554-9787553 Populus trichocarpa
Potri.010G071000 10.0kb upstream 10.0kb upstream 13450 true Chr10: 9769104-9782553 Populus trichocarpa
Potri.010G071000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 9769104-9779103 Populus trichocarpa
Potri.010G071000 10.0kb downstream 10.0kb downstream 13450 true Chr10: 9779104-9792553 Populus trichocarpa
Potri.010G071000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 9782554-9792553 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.088     High High
cufflinks 10.624     High  
cufflinks 12.39     High  
cufflinks 10.24     High  
cufflinks 7.793       Low
cufflinks 12.045     High  
cufflinks 10.216     High  
cufflinks 11.181     High  
cufflinks 17.3     High  
cufflinks 11.833     High  
cufflinks 9.842        
cufflinks 29.182     High High
cufflinks 47.568     High High
cufflinks 13.811     High  
cufflinks 21.733     High  
cufflinks 12.271     High  
cufflinks 6.745       Low
cufflinks 13.795     High  
cufflinks 13.792     High  
cufflinks 7.947       Low
cufflinks 14.046     High  
cufflinks 9.725     High  
cufflinks 19.491     High  
cufflinks 9.427        
cufflinks 24.838        
cufflinks 14.937        
cufflinks 15.547        
cufflinks 24.471        
cufflinks 30.053     High  
cufflinks 14.406        

0 Strain