Gene : Potri.008G178700 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR24322:SF619 - 3-OXOACYL-[ACYL-CARRIER-PROTEIN] REDUCTASE, CHLOROPLASTIC Genomic Order:  1787
Name:  ? Potri.008G178700 Secondary Identifier:  ? PAC:27037329
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5971 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5973 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7663 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6282 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7388 Populus trichocarpa pathologic  
Ptrichocarpa FASYN-ELONG-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-5989 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5156 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G178700 0.5kb upstream 0.5kb upstream 5101 true Chr08: 12209195-12214295 Populus trichocarpa
Potri.008G178700 0.5kb upstream 0.5kb upstream 500 false Chr08: 12209195-12209694 Populus trichocarpa
Potri.008G178700 0.5kb downstream 0.5kb downstream 5101 true Chr08: 12209695-12214795 Populus trichocarpa
Potri.008G178700 0.5kb downstream 0.5kb downstream 500 false Chr08: 12214296-12214795 Populus trichocarpa
Potri.008G178700 1.0kb upstream 1.0kb upstream 5601 true Chr08: 12208695-12214295 Populus trichocarpa
Potri.008G178700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 12208695-12209694 Populus trichocarpa
Potri.008G178700 1.0kb downstream 1.0kb downstream 5601 true Chr08: 12209695-12215295 Populus trichocarpa
Potri.008G178700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 12214296-12215295 Populus trichocarpa
Potri.008G178700 2.0kb upstream 2.0kb upstream 6601 true Chr08: 12207695-12214295 Populus trichocarpa
Potri.008G178700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 12207695-12209694 Populus trichocarpa
Potri.008G178700 2.0kb downstream 2.0kb downstream 6601 true Chr08: 12209695-12216295 Populus trichocarpa
Potri.008G178700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 12214296-12216295 Populus trichocarpa
Potri.008G178700 5.0kb upstream 5.0kb upstream 9601 true Chr08: 12204695-12214295 Populus trichocarpa
Potri.008G178700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 12204695-12209694 Populus trichocarpa
Potri.008G178700 5.0kb downstream 5.0kb downstream 9601 true Chr08: 12209695-12219295 Populus trichocarpa
Potri.008G178700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 12214296-12219295 Populus trichocarpa
Potri.008G178700 10.0kb upstream 10.0kb upstream 14601 true Chr08: 12199695-12214295 Populus trichocarpa
Potri.008G178700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 12199695-12209694 Populus trichocarpa
Potri.008G178700 10.0kb downstream 10.0kb downstream 14601 true Chr08: 12209695-12224295 Populus trichocarpa
Potri.008G178700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 12214296-12224295 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.504        
cufflinks 11.987     High High
cufflinks 4.952        
cufflinks 3.088       Low
cufflinks 2.682       Low
cufflinks 3.318       Low
cufflinks 3.328       Low
cufflinks 7.929        
cufflinks 8.73        
cufflinks 5.036        
cufflinks 6.235        
cufflinks 8.516        
cufflinks 9.215     High  
cufflinks 10.473     High High
cufflinks 5.942        
cufflinks 7.952        
cufflinks 11.314     High High
cufflinks 7.006        
cufflinks 2.15       Low
cufflinks 8.512        
cufflinks 3.678        
cufflinks 3.616       Low
cufflinks 8.827     High  
cufflinks 7.063        
cufflinks 9.246        
cufflinks 10.678        
cufflinks 12.733        
cufflinks 18.146        
cufflinks 18.012        
cufflinks 8.841       Low

0 Strain