Gene : Potri.008G126900 P. trichocarpa v3.0
Defline:  (1 of 2) K12200 - programmed cell death 6-interacting protein (PDCD6IP, ALIX, RIM20) Genomic Order:  1269
Name:  ? Potri.008G126900 Secondary Identifier:  ? PAC:27040070
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G126900 0.5kb upstream 0.5kb upstream 7112 true Chr08: 8277318-8284429 Populus trichocarpa
Potri.008G126900 0.5kb upstream 0.5kb upstream 500 false Chr08: 8277318-8277817 Populus trichocarpa
Potri.008G126900 0.5kb downstream 0.5kb downstream 7112 true Chr08: 8277818-8284929 Populus trichocarpa
Potri.008G126900 0.5kb downstream 0.5kb downstream 500 false Chr08: 8284430-8284929 Populus trichocarpa
Potri.008G126900 1.0kb upstream 1.0kb upstream 7612 true Chr08: 8276818-8284429 Populus trichocarpa
Potri.008G126900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 8276818-8277817 Populus trichocarpa
Potri.008G126900 1.0kb downstream 1.0kb downstream 7612 true Chr08: 8277818-8285429 Populus trichocarpa
Potri.008G126900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 8284430-8285429 Populus trichocarpa
Potri.008G126900 2.0kb upstream 2.0kb upstream 8612 true Chr08: 8275818-8284429 Populus trichocarpa
Potri.008G126900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 8275818-8277817 Populus trichocarpa
Potri.008G126900 2.0kb downstream 2.0kb downstream 8612 true Chr08: 8277818-8286429 Populus trichocarpa
Potri.008G126900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 8284430-8286429 Populus trichocarpa
Potri.008G126900 5.0kb upstream 5.0kb upstream 11612 true Chr08: 8272818-8284429 Populus trichocarpa
Potri.008G126900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 8272818-8277817 Populus trichocarpa
Potri.008G126900 5.0kb downstream 5.0kb downstream 11612 true Chr08: 8277818-8289429 Populus trichocarpa
Potri.008G126900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 8284430-8289429 Populus trichocarpa
Potri.008G126900 10.0kb upstream 10.0kb upstream 16612 true Chr08: 8267818-8284429 Populus trichocarpa
Potri.008G126900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 8267818-8277817 Populus trichocarpa
Potri.008G126900 10.0kb downstream 10.0kb downstream 16612 true Chr08: 8277818-8294429 Populus trichocarpa
Potri.008G126900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 8284430-8294429 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.274     High  
cufflinks 10.005     High  
cufflinks 12.169     High High
cufflinks 6.866        
cufflinks 6.96        
cufflinks 6.817        
cufflinks 7.97        
cufflinks 7.951        
cufflinks 7.532        
cufflinks 7.019        
cufflinks 4.671       Low
cufflinks 19.61     High High
cufflinks 7.046        
cufflinks 7.905        
cufflinks 13.011     High High
cufflinks 13.031     High High
cufflinks 6.609        
cufflinks 6.645        
cufflinks 16.563     High High
cufflinks 6.558        
cufflinks 9.227        
cufflinks 7.092        
cufflinks 10.81     High  
cufflinks 7.325        
cufflinks 33.626     High  
cufflinks 33.699     High  
cufflinks 33.369     High  
cufflinks 29.953     High  
cufflinks 27.82       Low
cufflinks 33.95     High  

0 Strain