Gene : Potri.002G254900 P. trichocarpa v3.0
Defline:  (1 of 2) 1.1.1.1//1.1.1.284//1.2.1.1 - Alcohol dehydrogenase / Aldehyde reductase // S-(hydroxymethyl)glutathione dehydrogenase / NAD-linked formaldehyde dehydrogenase // Transferred entry: 1.1.1.284 and 4.4.1.22 Genomic Order:  2549
Name:  ? Potri.002G254900 Secondary Identifier:  ? PAC:27022926
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6802 Populus trichocarpa pathologic  
Ptrichocarpa PWY66-389 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5486 Populus trichocarpa pathologic  
Ptrichocarpa PWY66-21 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6333 Populus trichocarpa pathologic  
Ptrichocarpa PWY-1801 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G254900 0.5kb upstream 0.5kb upstream 5136 true Chr02: 24432826-24437961 Populus trichocarpa
Potri.002G254900 0.5kb upstream 0.5kb upstream 500 false Chr02: 24432826-24433325 Populus trichocarpa
Potri.002G254900 0.5kb downstream 0.5kb downstream 5136 true Chr02: 24433326-24438461 Populus trichocarpa
Potri.002G254900 0.5kb downstream 0.5kb downstream 500 false Chr02: 24437962-24438461 Populus trichocarpa
Potri.002G254900 1.0kb upstream 1.0kb upstream 5636 true Chr02: 24432326-24437961 Populus trichocarpa
Potri.002G254900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 24432326-24433325 Populus trichocarpa
Potri.002G254900 1.0kb downstream 1.0kb downstream 5636 true Chr02: 24433326-24438961 Populus trichocarpa
Potri.002G254900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 24437962-24438961 Populus trichocarpa
Potri.002G254900 2.0kb upstream 2.0kb upstream 6636 true Chr02: 24431326-24437961 Populus trichocarpa
Potri.002G254900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 24431326-24433325 Populus trichocarpa
Potri.002G254900 2.0kb downstream 2.0kb downstream 6636 true Chr02: 24433326-24439961 Populus trichocarpa
Potri.002G254900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 24437962-24439961 Populus trichocarpa
Potri.002G254900 5.0kb upstream 5.0kb upstream 9636 true Chr02: 24428326-24437961 Populus trichocarpa
Potri.002G254900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 24428326-24433325 Populus trichocarpa
Potri.002G254900 5.0kb downstream 5.0kb downstream 9636 true Chr02: 24433326-24442961 Populus trichocarpa
Potri.002G254900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 24437962-24442961 Populus trichocarpa
Potri.002G254900 10.0kb upstream 10.0kb upstream 14636 true Chr02: 24423326-24437961 Populus trichocarpa
Potri.002G254900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 24423326-24433325 Populus trichocarpa
Potri.002G254900 10.0kb downstream 10.0kb downstream 14636 true Chr02: 24433326-24447961 Populus trichocarpa
Potri.002G254900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 24437962-24447961 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 106.609     High  
cufflinks 4.757        
cufflinks 4.367        
cufflinks 6.189        
cufflinks 5.149        
cufflinks 2.635       Low
cufflinks 4.603        
cufflinks 6.138        
cufflinks 5.831        
cufflinks 5.951        
cufflinks 3.349       Low
cufflinks 6.129        
cufflinks 5.952        
cufflinks 5.702        
cufflinks 4.198        
cufflinks 3.112       Low
cufflinks 6.828       High
cufflinks 4.968        
cufflinks 4.301        
cufflinks 6.138        
cufflinks 5.468        
cufflinks 4.278        
cufflinks 5.905        
cufflinks 5.652        
cufflinks 6.561       High
cufflinks 116.554     High  
cufflinks 105.947     High  
cufflinks 106.97     High  
cufflinks 136.886     High High
cufflinks 121.898     High  

0 Strain