Gene : Potri.001G403100 P. trichocarpa v3.0
Defline:  (1 of 2) K14820 - ribosome biogenesis protein BRX1 (BRX1, BRIX1) Genomic Order:  4031
Name:  ? Potri.001G403100 Secondary Identifier:  ? PAC:27040400
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G403100 0.5kb upstream 0.5kb upstream 5654 true Chr01: 42438386-42444039 Populus trichocarpa
Potri.001G403100 0.5kb upstream 0.5kb upstream 500 false Chr01: 42443540-42444039 Populus trichocarpa
Potri.001G403100 0.5kb downstream 0.5kb downstream 5654 true Chr01: 42437886-42443539 Populus trichocarpa
Potri.001G403100 0.5kb downstream 0.5kb downstream 500 false Chr01: 42437886-42438385 Populus trichocarpa
Potri.001G403100 1.0kb upstream 1.0kb upstream 6154 true Chr01: 42438386-42444539 Populus trichocarpa
Potri.001G403100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 42443540-42444539 Populus trichocarpa
Potri.001G403100 1.0kb downstream 1.0kb downstream 6154 true Chr01: 42437386-42443539 Populus trichocarpa
Potri.001G403100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 42437386-42438385 Populus trichocarpa
Potri.001G403100 2.0kb upstream 2.0kb upstream 7154 true Chr01: 42438386-42445539 Populus trichocarpa
Potri.001G403100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 42443540-42445539 Populus trichocarpa
Potri.001G403100 2.0kb downstream 2.0kb downstream 7154 true Chr01: 42436386-42443539 Populus trichocarpa
Potri.001G403100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 42436386-42438385 Populus trichocarpa
Potri.001G403100 5.0kb upstream 5.0kb upstream 10154 true Chr01: 42438386-42448539 Populus trichocarpa
Potri.001G403100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 42443540-42448539 Populus trichocarpa
Potri.001G403100 5.0kb downstream 5.0kb downstream 10154 true Chr01: 42433386-42443539 Populus trichocarpa
Potri.001G403100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 42433386-42438385 Populus trichocarpa
Potri.001G403100 10.0kb upstream 10.0kb upstream 15154 true Chr01: 42438386-42453539 Populus trichocarpa
Potri.001G403100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 42443540-42453539 Populus trichocarpa
Potri.001G403100 10.0kb downstream 10.0kb downstream 15154 true Chr01: 42428386-42443539 Populus trichocarpa
Potri.001G403100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 42428386-42438385 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.534       Low
cufflinks 1.406       Low
cufflinks 2.338        
cufflinks 2.332        
cufflinks 3.094       High
cufflinks 1.617       Low
cufflinks 6.7       High
cufflinks 2.874        
cufflinks 2.644        
cufflinks 1.595       Low
cufflinks 2.59        
cufflinks 1.657        
cufflinks 2.671        
cufflinks 1.893        
cufflinks 2.834        
cufflinks 1.981        
cufflinks 2.047        
cufflinks 1.999        
cufflinks 2.124        
cufflinks 2.149        
cufflinks 2.205        
cufflinks 2.434        
cufflinks 2.459        
cufflinks 2.164        
cufflinks 30.994     High  
cufflinks 30.84     High  
cufflinks 26.679     High  
cufflinks 38.619     High High
cufflinks 39.055     High High
cufflinks 34.29     High  

0 Strain