Gene : Potri.001G003900 P. trichocarpa v3.0
Defline:  (1 of 2) 3.4.22.54 - Calpain-3 / Muscle-specific calcium-activated neutral protease 3 Genomic Order:  39
Name:  ? Potri.001G003900 Secondary Identifier:  ? PAC:27046598
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G003900 0.5kb upstream 0.5kb upstream 14925 true Chr01: 230119-245043 Populus trichocarpa
Potri.001G003900 0.5kb upstream 0.5kb upstream 500 false Chr01: 230119-230618 Populus trichocarpa
Potri.001G003900 0.5kb downstream 0.5kb downstream 14925 true Chr01: 230619-245543 Populus trichocarpa
Potri.001G003900 0.5kb downstream 0.5kb downstream 500 false Chr01: 245044-245543 Populus trichocarpa
Potri.001G003900 1.0kb upstream 1.0kb upstream 15425 true Chr01: 229619-245043 Populus trichocarpa
Potri.001G003900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 229619-230618 Populus trichocarpa
Potri.001G003900 1.0kb downstream 1.0kb downstream 15425 true Chr01: 230619-246043 Populus trichocarpa
Potri.001G003900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 245044-246043 Populus trichocarpa
Potri.001G003900 2.0kb upstream 2.0kb upstream 16425 true Chr01: 228619-245043 Populus trichocarpa
Potri.001G003900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 228619-230618 Populus trichocarpa
Potri.001G003900 2.0kb downstream 2.0kb downstream 16425 true Chr01: 230619-247043 Populus trichocarpa
Potri.001G003900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 245044-247043 Populus trichocarpa
Potri.001G003900 5.0kb upstream 5.0kb upstream 19425 true Chr01: 225619-245043 Populus trichocarpa
Potri.001G003900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 225619-230618 Populus trichocarpa
Potri.001G003900 5.0kb downstream 5.0kb downstream 19425 true Chr01: 230619-250043 Populus trichocarpa
Potri.001G003900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 245044-250043 Populus trichocarpa
Potri.001G003900 10.0kb upstream 10.0kb upstream 24425 true Chr01: 220619-245043 Populus trichocarpa
Potri.001G003900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 220619-230618 Populus trichocarpa
Potri.001G003900 10.0kb downstream 10.0kb downstream 24425 true Chr01: 230619-255043 Populus trichocarpa
Potri.001G003900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 245044-255043 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.324       Low
cufflinks 1.252       Low
cufflinks 1.587        
cufflinks 3.788        
cufflinks 6.582       High
cufflinks 2.472        
cufflinks 1.931        
cufflinks 1.38       Low
cufflinks 2.621        
cufflinks 2.633        
cufflinks 1.585        
cufflinks 2.056        
cufflinks 1.941        
cufflinks 2.471        
cufflinks 2.061        
cufflinks 1.063       Low
cufflinks 7.112       High
cufflinks 1.288       Low
cufflinks 2.282        
cufflinks 4.439       High
cufflinks 2.031        
cufflinks 3.413        
cufflinks 4.247       High
cufflinks 2.149        
cufflinks 13.317       Low
cufflinks 24.578       High
cufflinks 25.107       High
cufflinks 17.11        
cufflinks 20.901        
cufflinks 19.562        

0 Strain