Protein Domain : IPR008952

Type:  Domain Name:  Tetraspanin, EC2 domain
Description:  Tetraspanins are a distinct family of proteins, containing four transmembrane domains: a small outer loop (EC1), a larger outer loop (EC2), a small inner loop (IL) and short cytoplasmic tails. They contain characteristic structural features, including 4-6 conserved extracellular cysteine residues, and polar residues within transmembrane domains. A fundamental role of tetraspanins appears to be organizing other proteins into a network of multimolecular membrane microdomains, sometimes called the `tetraspanin web'. Within this web there are primary complexes in which tetraspanins show robust, specific, and direct lateral associations with other proteins. The strong tendency of tetraspanins to associate with each other probably contributes to the assembly of a network of secondary interactions in which non-tetraspanin proteins are associated with each other via palmitoylated tetraspanins acting as linker proteins. In addition, the association of lipids, such as gangliosides and cholesterol, probably contributes to the assembly of even larger tetraspanin complexes, which have some lipid raft-like properties (e.g. resistance to solubilization in non-ionic detergents). Within the tetraspanin web, tetraspanin proteins can associate not only with integrins and other transmembrane proteins, but also with signalling enzymes such as protein kinase C and phosphatidylinositol-4 kinase. Thus, the tetraspanin web provides a mechanistic framework by which membrane protein signalling can be expanded into a lateral dimension [].This entry represents the EC2 domain from tetraspanins, consisting of 5 helices in an irregular disulphide-linked array which plays a role in form homodimerization. Short Name:  Tetraspanin_EC2

1 Child Features

DB identifier Type Name
IPR028977 Domain CD81 antigen, large extracellular loop domain

1 Contains

DB identifier Type Name
IPR018498 Conserved_site Peripherin/rom-1, conserved site

1 Cross References

Identifier
SSF48652

3 Found Ins

DB identifier Type Name
IPR000301 Family Tetraspanin
IPR018499 Family Tetraspanin/Peripherin
IPR000830 Family Peripherin/rom-1

1 GO Annotation

GO Term Gene Name
GO:0016021 IPR008952

1 Ontology Annotations

GO Term Gene Name
GO:0016021 IPR008952

0 Parent Features

82 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
Lus10032399 PAC:23168551 Linum usitatissimum 398  
Lus10001532 PAC:23146004 Linum usitatissimum 414  
Glyma.11G016400.1.p K7LMJ6 PAC:30529983 Glycine max 93  
Glyma.02G091100.1.p I1JDN0 PAC:30509282 Glycine max 134  
Brara.H00476.1.p A0A397Y812 PAC:30647568 Brassica rapa FPsc 127  
SapurV1A.0134s0220.1.p PAC:31403602 Salix purpurea 204  
Traes_3DL_6C6552AAD.3 PAC:31881607 Triticum aestivum 67  
Traes_6AS_11466A986.6 PAC:31876779 Triticum aestivum 706  
Traes_6AS_11466A986.8 PAC:31876782 Triticum aestivum 478  
Traes_6AS_F4BE66D16.2 PAC:31862882 Triticum aestivum 649  
Traes_6AS_F4BE66D16.3 PAC:31862883 Triticum aestivum 621  
Traes_6BS_3898FE3CB.2 PAC:31821786 Triticum aestivum 1407  
Traes_6BS_3898FE3CB.5 PAC:31821789 Triticum aestivum 1062  
Traes_6BS_3898FE3CB.6 PAC:31821790 Triticum aestivum 638  
Traes_6BS_3898FE3CB.3 PAC:31821787 Triticum aestivum 1385  
Traes_6BS_3898FE3CB.4 PAC:31821788 Triticum aestivum 1062  
Traes_6BS_6B4899E67.2 PAC:31867406 Triticum aestivum 655  
Traes_6BS_6B4899E67.3 PAC:31867407 Triticum aestivum 631  
Traes_7BL_9B51C5999.1 PAC:31851155 Triticum aestivum 58  
Manes.02G008800.1.p A0A2C9W9R2 PAC:32332454 Manihot esculenta 267  
Zosma117g00650.1 A0A0K9Q415 PAC:33184917 Zostera marina 126  
Solyc08g082500.1.1 PAC:36150852 Solanum lycopersicum 224  
Solyc00g209460.1.1 PAC:36127621 Solanum lycopersicum 110  
Oeu017339.1 PAC:37709482 Olea europaea 367  
Gohir.A09G190000.1.p PAC:38149957 Gossypium hirsutum 407  
HORVU6Hr1G003140.1 PAC:38496394 Hordeum vulgare 178  
HORVU6Hr1G009940.1 PAC:38494165 Hordeum vulgare 310  
HORVU6Hr1G010140.2 PAC:38497339 Hordeum vulgare 292  
HORVU6Hr1G010140.3 PAC:38497340 Hordeum vulgare 196  
HORVU6Hr1G010140.1 PAC:38497338 Hordeum vulgare 337  

1 Publications

First Author Title Year Journal Volume Pages PubMed ID
            12575999