Gene : Lus10008417.g L. usitatissimum v1.0
Defline:  (1 of 2) 5.3.1.23 - S-methyl-5-thioribose-1-phosphate isomerase / S-methyl-5-thio-D-ribose-1-phosphate aldose-ketose-isomerase Genomic Order:  18
Name:  ? Lus10008417.g Secondary Identifier:  ? PAC:23163476
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-4361 Linum usitatissimum pathologic  
Lusitatissimum PWY-7270 Linum usitatissimum pathologic  
Lusitatissimum PWY-7528 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10008417.g 0.5kb upstream 0.5kb upstream 3035 true scaffold61: 61405-64439 Linum usitatissimum
Lus10008417.g 0.5kb upstream 0.5kb upstream 500 false scaffold61: 63940-64439 Linum usitatissimum
Lus10008417.g 0.5kb downstream 0.5kb downstream 3035 true scaffold61: 60905-63939 Linum usitatissimum
Lus10008417.g 0.5kb downstream 0.5kb downstream 500 false scaffold61: 60905-61404 Linum usitatissimum
Lus10008417.g 1.0kb upstream 1.0kb upstream 3535 true scaffold61: 61405-64939 Linum usitatissimum
Lus10008417.g 1.0kb upstream 1.0kb upstream 1000 false scaffold61: 63940-64939 Linum usitatissimum
Lus10008417.g 1.0kb downstream 1.0kb downstream 3535 true scaffold61: 60405-63939 Linum usitatissimum
Lus10008417.g 1.0kb downstream 1.0kb downstream 1000 false scaffold61: 60405-61404 Linum usitatissimum
Lus10008417.g 2.0kb upstream 2.0kb upstream 4535 true scaffold61: 61405-65939 Linum usitatissimum
Lus10008417.g 2.0kb upstream 2.0kb upstream 2000 false scaffold61: 63940-65939 Linum usitatissimum
Lus10008417.g 2.0kb downstream 2.0kb downstream 4535 true scaffold61: 59405-63939 Linum usitatissimum
Lus10008417.g 2.0kb downstream 2.0kb downstream 2000 false scaffold61: 59405-61404 Linum usitatissimum
Lus10008417.g 5.0kb upstream 5.0kb upstream 7535 true scaffold61: 61405-68939 Linum usitatissimum
Lus10008417.g 5.0kb upstream 5.0kb upstream 5000 false scaffold61: 63940-68939 Linum usitatissimum
Lus10008417.g 5.0kb downstream 5.0kb downstream 7535 true scaffold61: 56405-63939 Linum usitatissimum
Lus10008417.g 5.0kb downstream 5.0kb downstream 5000 false scaffold61: 56405-61404 Linum usitatissimum
Lus10008417.g 10.0kb upstream 10.0kb upstream 12535 true scaffold61: 61405-73939 Linum usitatissimum
Lus10008417.g 10.0kb upstream 10.0kb upstream 10000 false scaffold61: 63940-73939 Linum usitatissimum
Lus10008417.g 10.0kb downstream 10.0kb downstream 12535 true scaffold61: 51405-63939 Linum usitatissimum
Lus10008417.g 10.0kb downstream 10.0kb downstream 10000 false scaffold61: 51405-61404 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454524 5262 Malpighiales View MSA
124238790 5268 Malvidae View MSA
124060423 5270 Rosid View MSA
123740094 5271 Pentapetalae View MSA
122788864 5272 Eudicot View MSA
122043863 5273 Angiosperm View MSA
121310201 5274 Embryophyte View MSA
123428305 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain