Gene : Lus10030843.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR11451:SF33 - THREONINE--TRNA LIGASE, CYTOPLASMIC Genomic Order:  179
Name:  ? Lus10030843.g Secondary Identifier:  ? PAC:23155395
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum TRNA-CHARGING-PWY Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10030843.g 0.5kb upstream 0.5kb upstream 1693 true scaffold373: 829445-831137 Linum usitatissimum
Lus10030843.g 0.5kb upstream 0.5kb upstream 500 false scaffold373: 830638-831137 Linum usitatissimum
Lus10030843.g 0.5kb downstream 0.5kb downstream 1693 true scaffold373: 828945-830637 Linum usitatissimum
Lus10030843.g 0.5kb downstream 0.5kb downstream 500 false scaffold373: 828945-829444 Linum usitatissimum
Lus10030843.g 1.0kb upstream 1.0kb upstream 2193 true scaffold373: 829445-831637 Linum usitatissimum
Lus10030843.g 1.0kb upstream 1.0kb upstream 1000 false scaffold373: 830638-831637 Linum usitatissimum
Lus10030843.g 1.0kb downstream 1.0kb downstream 2193 true scaffold373: 828445-830637 Linum usitatissimum
Lus10030843.g 1.0kb downstream 1.0kb downstream 1000 false scaffold373: 828445-829444 Linum usitatissimum
Lus10030843.g 2.0kb upstream 2.0kb upstream 3193 true scaffold373: 829445-832637 Linum usitatissimum
Lus10030843.g 2.0kb upstream 2.0kb upstream 2000 false scaffold373: 830638-832637 Linum usitatissimum
Lus10030843.g 2.0kb downstream 2.0kb downstream 3193 true scaffold373: 827445-830637 Linum usitatissimum
Lus10030843.g 2.0kb downstream 2.0kb downstream 2000 false scaffold373: 827445-829444 Linum usitatissimum
Lus10030843.g 5.0kb upstream 5.0kb upstream 6193 true scaffold373: 829445-835637 Linum usitatissimum
Lus10030843.g 5.0kb upstream 5.0kb upstream 5000 false scaffold373: 830638-835637 Linum usitatissimum
Lus10030843.g 5.0kb downstream 5.0kb downstream 6193 true scaffold373: 824445-830637 Linum usitatissimum
Lus10030843.g 5.0kb downstream 5.0kb downstream 5000 false scaffold373: 824445-829444 Linum usitatissimum
Lus10030843.g 10.0kb upstream 10.0kb upstream 11193 true scaffold373: 829445-840637 Linum usitatissimum
Lus10030843.g 10.0kb upstream 10.0kb upstream 10000 false scaffold373: 830638-840637 Linum usitatissimum
Lus10030843.g 10.0kb downstream 10.0kb downstream 11193 true scaffold373: 819445-830637 Linum usitatissimum
Lus10030843.g 10.0kb downstream 10.0kb downstream 10000 false scaffold373: 819445-829444 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026743 5273 Angiosperm View MSA
122420298 5262 Malpighiales Singleton cluster - no MSA
124212651 5268 Malvidae Singleton cluster - no MSA
124051217 5270 Rosid View MSA
123745441 5271 Pentapetalae View MSA
122771506 5272 Eudicot View MSA
121296521 5274 Embryophyte View MSA
123334669 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain