GO Term : GO:0004651 polynucleotide 5'-phosphatase activity GO

Namespace:  molecular_function Obsolete:  false
description  Catalysis of the reaction: 5'-phosphopolynucleotide + H2O = polynucleotide + phosphate.

0 Cross References

1 Data Sets

Name URL
InterPro domain GO annotations  

1 Ontology

Name
GO

10158 Ontology Annotations

Class GO Term Gene Name Db
OntologyAnnotation GO:0004651 evm.model.supercontig_56.109 GO
GOAnnotation GO:0004651 evm.TU.supercontig_56.109  
GOAnnotation GO:0004651 29647.t000117  
OntologyAnnotation GO:0004651 29647.m002109 GO
GOAnnotation GO:0004651 Cucsa.067000  
OntologyAnnotation GO:0004651 Cucsa.067000.14 GO
OntologyAnnotation GO:0004651 Cucsa.067000.15 GO
OntologyAnnotation GO:0004651 Cucsa.067000.1 GO
OntologyAnnotation GO:0004651 Cucsa.067000.13 GO
OntologyAnnotation GO:0004651 Cucsa.067000.2 GO
OntologyAnnotation GO:0004651 Cucsa.067000.7 GO
GOAnnotation GO:0004651 orange1.1g005672m.g  
OntologyAnnotation GO:0004651 orange1.1g005797m GO
OntologyAnnotation GO:0004651 orange1.1g005779m GO
OntologyAnnotation GO:0004651 orange1.1g005672m GO
OntologyAnnotation GO:0004651 orange1.1g005792m GO
OntologyAnnotation GO:0004651 orange1.1g005774m GO
OntologyAnnotation GO:0004651 orange1.1g006504m GO
GOAnnotation GO:0004651 AT5G01290  
OntologyAnnotation GO:0004651 AT5G01290.1 GO
OntologyAnnotation GO:0004651 AT5G28210.1 GO
GOAnnotation GO:0004651 AT5G28210  
GOAnnotation GO:0004651 Thhalv10000074m.g  
OntologyAnnotation GO:0004651 Thhalv10000074m GO
GOAnnotation GO:0004651 Thhalv10005507m.g  
OntologyAnnotation GO:0004651 Thhalv10005507m GO
GOAnnotation GO:0004651 Ciclev10011182m.g  
OntologyAnnotation GO:0004651 Ciclev10011225m GO
OntologyAnnotation GO:0004651 Ciclev10011182m GO
GOAnnotation GO:0004651 Potri.006G096000  

26 Parents

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0016787 hydrolase activity Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0016311 dephosphorylation The process of removing one or more phosphoric (ester or anhydride) residues from a molecule.
GO:0016791 phosphatase activity Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate.
GO:0006796 phosphate-containing compound metabolic process The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid.
GO:0044237 cellular metabolic process The chemical reactions and pathways by which individual cells transform chemical substances.
GO:0016788 hydrolase activity, acting on ester bonds Catalysis of the hydrolysis of any ester bond.
GO:0006807 nitrogen compound metabolic process The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen, including (but not limited to) nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium.
GO:0006139 nucleobase-containing compound metabolic process Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids.
GO:0042578 phosphoric ester hydrolase activity Catalysis of the reaction: RPO-R' + H2O = RPOOH + R'H. This reaction is the hydrolysis of any phosphoric ester bond, any ester formed from orthophosphoric acid, O=P(OH)3.
GO:0071704 organic substance metabolic process The chemical reactions and pathways involving an organic substance, any molecular entity containing carbon.
GO:0044238 primary metabolic process The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism.
GO:0006725 cellular aromatic compound metabolic process The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells.
GO:0004651 polynucleotide 5'-phosphatase activity Catalysis of the reaction: 5'-phosphopolynucleotide + H2O = polynucleotide + phosphate.
GO:0009987 cellular process Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.
GO:0006793 phosphorus metabolic process The chemical reactions and pathways involving the nonmetallic element phosphorus or compounds that contain phosphorus, usually in the form of a phosphate group (PO4).
GO:0008150 biological_process Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
GO:0003674 molecular_function Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions.
GO:0034641 cellular nitrogen compound metabolic process The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds, as carried out by individual cells.
GO:1901360 organic cyclic compound metabolic process The chemical reactions and pathways involving organic cyclic compound.
GO:0046483 heterocycle metabolic process The chemical reactions and pathways involving heterocyclic compounds, those with a cyclic molecular structure and at least two different atoms in the ring (or rings).
GO:0043170 macromolecule metabolic process The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.
GO:0098518 polynucleotide phosphatase activity Catalysis of the reaction: phosphopolynucleotide + H2O = polynucleotide + phosphate.
GO:0098507 polynucleotide 5' dephosphorylation The process of removing one or more phosphate groups from the 5' end of a polynucleotide.
GO:0098501 polynucleotide dephosphorylation The process of removing one or more phosphate groups from a polynucleotide.

25 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
is_a GO:0098518 GO:0004651
part of GO:0098507 GO:0004651
is_a GO:0042578 GO:0004651
part of GO:0006725 GO:0004651
is_a GO:0016787 GO:0004651
part of GO:0046483 GO:0004651
part of GO:0098501 GO:0004651
is_a GO:0016788 GO:0004651
part of GO:0006807 GO:0004651
is_a GO:0003824 GO:0004651
is_a GO:0016791 GO:0004651
part of GO:0071704 GO:0004651
part of GO:1901360 GO:0004651
part of GO:0043170 GO:0004651
part of GO:0008150 GO:0004651
is_a GO:0003674 GO:0004651
part of GO:0008152 GO:0004651
part of GO:0044238 GO:0004651
part of GO:0044237 GO:0004651
part of GO:0016311 GO:0004651
part of GO:0034641 GO:0004651
part of GO:0006793 GO:0004651
part of GO:0006796 GO:0004651
part of GO:0009987 GO:0004651
part of GO:0006139 GO:0004651

3 Synonyms

Name Type
5'-polynucleotidase activity synonym
polynucleotide 5'-triphosphatase activity synonym
polynucleotide 5'-phosphohydrolase activity synonym