GO Term : GO:0030570 pectate lyase activity GO

Namespace:  molecular_function Obsolete:  false
description  Catalysis of the reaction: a pectate = a pectate + a pectate oligosaccharide with 4-(4-deoxy-alpha-D-galact-4-enuronosyl)-D-galacturonate end. This reaction is the eliminative cleavage of pectate to give oligosaccharides with 4-deoxy-alpha-D-gluc-4-enuronosyl groups at their non-reducing ends.

0 Cross References

1 Data Sets

Name URL
InterPro domain GO annotations  

1 Ontology

Name
GO

10158 Ontology Annotations

Class GO Term Gene Name Db
GOAnnotation GO:0030570 evm.TU.supercontig_14.39  
OntologyAnnotation GO:0030570 evm.model.supercontig_14.39 GO
OntologyAnnotation GO:0030570 evm.model.supercontig_17.208 GO
GOAnnotation GO:0030570 evm.TU.supercontig_17.208  
OntologyAnnotation GO:0030570 evm.model.supercontig_5.270 GO
GOAnnotation GO:0030570 evm.TU.supercontig_5.270  
OntologyAnnotation GO:0030570 29736.m002032 GO
GOAnnotation GO:0030570 29736.t000028  
OntologyAnnotation GO:0030570 29822.m003475 GO
GOAnnotation GO:0030570 29822.t000150  
GOAnnotation GO:0030570 30147.t000347  
OntologyAnnotation GO:0030570 30147.m014076 GO
GOAnnotation GO:0030570 Cucsa.005440  
OntologyAnnotation GO:0030570 Cucsa.005440.1 GO
GOAnnotation GO:0030570 Cucsa.097920  
OntologyAnnotation GO:0030570 Cucsa.097920.1 GO
OntologyAnnotation GO:0030570 Cucsa.285320.1 GO
GOAnnotation GO:0030570 Cucsa.285320  
GOAnnotation GO:0030570 Cucsa.339080  
OntologyAnnotation GO:0030570 Cucsa.339080.1 GO
GOAnnotation GO:0030570 orange1.1g013757m.g  
OntologyAnnotation GO:0030570 orange1.1g013757m GO
OntologyAnnotation GO:0030570 orange1.1g036607m GO
GOAnnotation GO:0030570 orange1.1g036607m.g  
GOAnnotation GO:0030570 AT1G14420  
OntologyAnnotation GO:0030570 AT1G14420.1 GO
OntologyAnnotation GO:0030570 AT2G02720.1 GO
GOAnnotation GO:0030570 AT2G02720  
GOAnnotation GO:0030570 AT3G01270  
OntologyAnnotation GO:0030570 AT3G01270.1 GO

8 Parents

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0016829 lyase activity Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
GO:0030570 pectate lyase activity Catalysis of the reaction: a pectate = a pectate + a pectate oligosaccharide with 4-(4-deoxy-alpha-D-galact-4-enuronosyl)-D-galacturonate end. This reaction is the eliminative cleavage of pectate to give oligosaccharides with 4-deoxy-alpha-D-gluc-4-enuronosyl groups at their non-reducing ends.
GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from a polysaccharide.
GO:0008150 biological_process Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
GO:0003674 molecular_function Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions.
GO:0016835 carbon-oxygen lyase activity Catalysis of the breakage of a carbon-oxygen bond.

7 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
is_a GO:0016837 GO:0030570
is_a GO:0016835 GO:0030570
is_a GO:0016829 GO:0030570
is_a GO:0003824 GO:0030570
part of GO:0008150 GO:0030570
is_a GO:0003674 GO:0030570
part of GO:0008152 GO:0030570

16 Synonyms

Name Type
pectin trans-eliminase activity synonym
alpha-1,4-D-endopolygalacturonic acid lyase activity synonym
(1->4)-alpha-D-galacturonan lyase activity synonym
endogalacturonate transeliminase activity synonym
endo-alpha-1,4-polygalacturonic acid lyase activity synonym
pectate transeliminase activity synonym
endopectin methyltranseliminase activity synonym
pectic acid transeliminase activity synonym
pectic acid lyase activity synonym
pectic lyase activity synonym
polygalacturonate lyase activity synonym
PGA lyase activity synonym
polygalacturonic acid trans-eliminase activity synonym
polygalacturonic acid lyase activity synonym
PPase-N activity synonym
polygalacturonic transeliminase activity synonym