Gene : Ciclev10031988m.g C. clementina v1.0
Defline:  (1 of 4) 2.5.1.16 - Spermidine synthase / Putrescine aminopropyltransferase Genomic Order:  2045
Name:  ? Ciclev10031988m.g Secondary Identifier:  ? PAC:20803404
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina BSUBPOLYAMSYN-PWY Citrus clementina pathologic  
Cclementina POLYAMINSYN3-PWY Citrus clementina pathologic  
Cclementina PWY-7528 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10031988m.g 0.5kb upstream 0.5kb upstream 3977 true scaffold_4: 22818301-22822277 Citrus clementina
Ciclev10031988m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 22818301-22818800 Citrus clementina
Ciclev10031988m.g 0.5kb downstream 0.5kb downstream 3977 true scaffold_4: 22818801-22822777 Citrus clementina
Ciclev10031988m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 22822278-22822777 Citrus clementina
Ciclev10031988m.g 1.0kb upstream 1.0kb upstream 4477 true scaffold_4: 22817801-22822277 Citrus clementina
Ciclev10031988m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 22817801-22818800 Citrus clementina
Ciclev10031988m.g 1.0kb downstream 1.0kb downstream 4477 true scaffold_4: 22818801-22823277 Citrus clementina
Ciclev10031988m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 22822278-22823277 Citrus clementina
Ciclev10031988m.g 2.0kb upstream 2.0kb upstream 5477 true scaffold_4: 22816801-22822277 Citrus clementina
Ciclev10031988m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 22816801-22818800 Citrus clementina
Ciclev10031988m.g 2.0kb downstream 2.0kb downstream 5477 true scaffold_4: 22818801-22824277 Citrus clementina
Ciclev10031988m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 22822278-22824277 Citrus clementina
Ciclev10031988m.g 5.0kb upstream 5.0kb upstream 8477 true scaffold_4: 22813801-22822277 Citrus clementina
Ciclev10031988m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 22813801-22818800 Citrus clementina
Ciclev10031988m.g 5.0kb downstream 5.0kb downstream 8477 true scaffold_4: 22818801-22827277 Citrus clementina
Ciclev10031988m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 22822278-22827277 Citrus clementina
Ciclev10031988m.g 10.0kb upstream 10.0kb upstream 13477 true scaffold_4: 22808801-22822277 Citrus clementina
Ciclev10031988m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 22808801-22818800 Citrus clementina
Ciclev10031988m.g 10.0kb downstream 10.0kb downstream 13477 true scaffold_4: 22818801-22832277 Citrus clementina
Ciclev10031988m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 22822278-22832277 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124342552 5266 SBM View MSA
124246037 5268 Malvidae View MSA
124061949 5270 Rosid View MSA
123741827 5271 Pentapetalae View MSA
122790008 5272 Eudicot View MSA
122043696 5273 Angiosperm View MSA
121346443 5274 Embryophyte View MSA
123424303 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain