Gene : Ciclev10024469m.g C. clementina v1.0
Defline:  (1 of 23) PF14223 - gag-polypeptide of LTR copia-type (UBN2) Genomic Order:  1671
Name:  ? Ciclev10024469m.g Secondary Identifier:  ? PAC:20808519
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10024469m.g 0.5kb upstream 0.5kb upstream 1609 true scaffold_3: 19810808-19812416 Citrus clementina
Ciclev10024469m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 19811917-19812416 Citrus clementina
Ciclev10024469m.g 0.5kb downstream 0.5kb downstream 1609 true scaffold_3: 19810308-19811916 Citrus clementina
Ciclev10024469m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 19810308-19810807 Citrus clementina
Ciclev10024469m.g 1.0kb upstream 1.0kb upstream 2109 true scaffold_3: 19810808-19812916 Citrus clementina
Ciclev10024469m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 19811917-19812916 Citrus clementina
Ciclev10024469m.g 1.0kb downstream 1.0kb downstream 2109 true scaffold_3: 19809808-19811916 Citrus clementina
Ciclev10024469m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 19809808-19810807 Citrus clementina
Ciclev10024469m.g 2.0kb upstream 2.0kb upstream 3109 true scaffold_3: 19810808-19813916 Citrus clementina
Ciclev10024469m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 19811917-19813916 Citrus clementina
Ciclev10024469m.g 2.0kb downstream 2.0kb downstream 3109 true scaffold_3: 19808808-19811916 Citrus clementina
Ciclev10024469m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 19808808-19810807 Citrus clementina
Ciclev10024469m.g 5.0kb upstream 5.0kb upstream 6109 true scaffold_3: 19810808-19816916 Citrus clementina
Ciclev10024469m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 19811917-19816916 Citrus clementina
Ciclev10024469m.g 5.0kb downstream 5.0kb downstream 6109 true scaffold_3: 19805808-19811916 Citrus clementina
Ciclev10024469m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 19805808-19810807 Citrus clementina
Ciclev10024469m.g 10.0kb upstream 10.0kb upstream 11109 true scaffold_3: 19810808-19821916 Citrus clementina
Ciclev10024469m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 19811917-19821916 Citrus clementina
Ciclev10024469m.g 10.0kb downstream 10.0kb downstream 11109 true scaffold_3: 19800808-19811916 Citrus clementina
Ciclev10024469m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 19800808-19810807 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121525917 5273 Angiosperm Singleton cluster - no MSA
124324794 5266 SBM Singleton cluster - no MSA
124170407 5268 Malvidae Singleton cluster - no MSA
123893178 5270 Rosid Singleton cluster - no MSA
123475155 5271 Pentapetalae Singleton cluster - no MSA
122510416 5272 Eudicot Singleton cluster - no MSA
120798679 5274 Embryophyte Singleton cluster - no MSA
122840233 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain