Gene : Ciclev10024359m.g C. clementina v1.0
Defline:  (1 of 1) PTHR11558//PTHR11558:SF28 - SPERMIDINE/SPERMINE SYNTHASE Genomic Order:  421
Name:  ? Ciclev10024359m.g Secondary Identifier:  ? PAC:20809675
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina BSUBPOLYAMSYN-PWY Citrus clementina pathologic  
Cclementina POLYAMINSYN3-PWY Citrus clementina pathologic  
Cclementina PWY-7528 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10024359m.g 0.5kb upstream 0.5kb upstream 3739 true scaffold_3: 2917716-2921454 Citrus clementina
Ciclev10024359m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2920955-2921454 Citrus clementina
Ciclev10024359m.g 0.5kb downstream 0.5kb downstream 3739 true scaffold_3: 2917216-2920954 Citrus clementina
Ciclev10024359m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2917216-2917715 Citrus clementina
Ciclev10024359m.g 1.0kb upstream 1.0kb upstream 4239 true scaffold_3: 2917716-2921954 Citrus clementina
Ciclev10024359m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2920955-2921954 Citrus clementina
Ciclev10024359m.g 1.0kb downstream 1.0kb downstream 4239 true scaffold_3: 2916716-2920954 Citrus clementina
Ciclev10024359m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2916716-2917715 Citrus clementina
Ciclev10024359m.g 2.0kb upstream 2.0kb upstream 5239 true scaffold_3: 2917716-2922954 Citrus clementina
Ciclev10024359m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2920955-2922954 Citrus clementina
Ciclev10024359m.g 2.0kb downstream 2.0kb downstream 5239 true scaffold_3: 2915716-2920954 Citrus clementina
Ciclev10024359m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2915716-2917715 Citrus clementina
Ciclev10024359m.g 5.0kb upstream 5.0kb upstream 8239 true scaffold_3: 2917716-2925954 Citrus clementina
Ciclev10024359m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2920955-2925954 Citrus clementina
Ciclev10024359m.g 5.0kb downstream 5.0kb downstream 8239 true scaffold_3: 2912716-2920954 Citrus clementina
Ciclev10024359m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2912716-2917715 Citrus clementina
Ciclev10024359m.g 10.0kb upstream 10.0kb upstream 13239 true scaffold_3: 2917716-2930954 Citrus clementina
Ciclev10024359m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2920955-2930954 Citrus clementina
Ciclev10024359m.g 10.0kb downstream 10.0kb downstream 13239 true scaffold_3: 2907716-2920954 Citrus clementina
Ciclev10024359m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2907716-2917715 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121665530 5273 Angiosperm View MSA
124348958 5266 SBM View MSA
124180994 5268 Malvidae View MSA
124050915 5270 Rosid View MSA
123619935 5271 Pentapetalae View MSA
122654361 5272 Eudicot View MSA
120937496 5274 Embryophyte View MSA
122977981 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain