Gene : Thhalv10018650m.g E. salsugineum v1.0
Defline:  (1 of 8) 3.2.1.67 - Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase Genomic Order:  248
Name:  ? Thhalv10018650m.g Secondary Identifier:  ? PAC:20190891
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-1081 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10018650m.g 0.5kb upstream 0.5kb upstream 1948 true scaffold_9: 949622-951569 Eutrema salsugineum
Thhalv10018650m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 949622-950121 Eutrema salsugineum
Thhalv10018650m.g 0.5kb downstream 0.5kb downstream 1948 true scaffold_9: 950122-952069 Eutrema salsugineum
Thhalv10018650m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 951570-952069 Eutrema salsugineum
Thhalv10018650m.g 1.0kb upstream 1.0kb upstream 2448 true scaffold_9: 949122-951569 Eutrema salsugineum
Thhalv10018650m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 949122-950121 Eutrema salsugineum
Thhalv10018650m.g 1.0kb downstream 1.0kb downstream 2448 true scaffold_9: 950122-952569 Eutrema salsugineum
Thhalv10018650m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 951570-952569 Eutrema salsugineum
Thhalv10018650m.g 2.0kb upstream 2.0kb upstream 3448 true scaffold_9: 948122-951569 Eutrema salsugineum
Thhalv10018650m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 948122-950121 Eutrema salsugineum
Thhalv10018650m.g 2.0kb downstream 2.0kb downstream 3448 true scaffold_9: 950122-953569 Eutrema salsugineum
Thhalv10018650m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 951570-953569 Eutrema salsugineum
Thhalv10018650m.g 5.0kb upstream 5.0kb upstream 6448 true scaffold_9: 945122-951569 Eutrema salsugineum
Thhalv10018650m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 945122-950121 Eutrema salsugineum
Thhalv10018650m.g 5.0kb downstream 5.0kb downstream 6448 true scaffold_9: 950122-956569 Eutrema salsugineum
Thhalv10018650m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 951570-956569 Eutrema salsugineum
Thhalv10018650m.g 10.0kb upstream 10.0kb upstream 11448 true scaffold_9: 940122-951569 Eutrema salsugineum
Thhalv10018650m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 940122-950121 Eutrema salsugineum
Thhalv10018650m.g 10.0kb downstream 10.0kb downstream 11448 true scaffold_9: 950122-961569 Eutrema salsugineum
Thhalv10018650m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 951570-961569 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371586 5261 Brassicaceae View MSA
123837525 5264 Brassicales-Malvales View MSA
124337889 5266 SBM View MSA
124240129 5268 Malvidae View MSA
124074410 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain