Gene : Thhalv10018091m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR11771:SF60 - LIPOXYGENASE 6, CHLOROPLASTIC Genomic Order:  1368
Name:  ? Thhalv10018091m.g Secondary Identifier:  ? PAC:20192264
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5409 Eutrema salsugineum pathologic  
Esalsugineum PWY-5410 Eutrema salsugineum pathologic  
Esalsugineum PWY-735 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10018091m.g 0.5kb upstream 0.5kb upstream 4988 true scaffold_9: 6451222-6456209 Eutrema salsugineum
Thhalv10018091m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 6455710-6456209 Eutrema salsugineum
Thhalv10018091m.g 0.5kb downstream 0.5kb downstream 4988 true scaffold_9: 6450722-6455709 Eutrema salsugineum
Thhalv10018091m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 6450722-6451221 Eutrema salsugineum
Thhalv10018091m.g 1.0kb upstream 1.0kb upstream 5488 true scaffold_9: 6451222-6456709 Eutrema salsugineum
Thhalv10018091m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 6455710-6456709 Eutrema salsugineum
Thhalv10018091m.g 1.0kb downstream 1.0kb downstream 5488 true scaffold_9: 6450222-6455709 Eutrema salsugineum
Thhalv10018091m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 6450222-6451221 Eutrema salsugineum
Thhalv10018091m.g 2.0kb upstream 2.0kb upstream 6488 true scaffold_9: 6451222-6457709 Eutrema salsugineum
Thhalv10018091m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 6455710-6457709 Eutrema salsugineum
Thhalv10018091m.g 2.0kb downstream 2.0kb downstream 6488 true scaffold_9: 6449222-6455709 Eutrema salsugineum
Thhalv10018091m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 6449222-6451221 Eutrema salsugineum
Thhalv10018091m.g 5.0kb upstream 5.0kb upstream 9488 true scaffold_9: 6451222-6460709 Eutrema salsugineum
Thhalv10018091m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 6455710-6460709 Eutrema salsugineum
Thhalv10018091m.g 5.0kb downstream 5.0kb downstream 9488 true scaffold_9: 6446222-6455709 Eutrema salsugineum
Thhalv10018091m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 6446222-6451221 Eutrema salsugineum
Thhalv10018091m.g 10.0kb upstream 10.0kb upstream 14488 true scaffold_9: 6451222-6465709 Eutrema salsugineum
Thhalv10018091m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 6455710-6465709 Eutrema salsugineum
Thhalv10018091m.g 10.0kb downstream 10.0kb downstream 14488 true scaffold_9: 6441222-6455709 Eutrema salsugineum
Thhalv10018091m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 6441222-6451221 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365902 5261 Brassicaceae View MSA
123839661 5264 Brassicales-Malvales View MSA
124340250 5266 SBM View MSA
124236928 5268 Malvidae View MSA
124068489 5270 Rosid View MSA
123750087 5271 Pentapetalae View MSA
122788853 5272 Eudicot View MSA
122051623 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain