Gene : Thhalv10023930m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR33180:SF4 - PHOTOSYSTEM II CP43 CHLOROPHYLL APOPROTEIN Genomic Order:  788
Name:  ? Thhalv10023930m.g Secondary Identifier:  ? PAC:20201580
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10023930m.g 0.5kb upstream 0.5kb upstream 1839 true scaffold_8: 9419754-9421592 Eutrema salsugineum
Thhalv10023930m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 9419754-9420253 Eutrema salsugineum
Thhalv10023930m.g 0.5kb downstream 0.5kb downstream 1839 true scaffold_8: 9420254-9422092 Eutrema salsugineum
Thhalv10023930m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 9421593-9422092 Eutrema salsugineum
Thhalv10023930m.g 1.0kb upstream 1.0kb upstream 2339 true scaffold_8: 9419254-9421592 Eutrema salsugineum
Thhalv10023930m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 9419254-9420253 Eutrema salsugineum
Thhalv10023930m.g 1.0kb downstream 1.0kb downstream 2339 true scaffold_8: 9420254-9422592 Eutrema salsugineum
Thhalv10023930m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 9421593-9422592 Eutrema salsugineum
Thhalv10023930m.g 2.0kb upstream 2.0kb upstream 3339 true scaffold_8: 9418254-9421592 Eutrema salsugineum
Thhalv10023930m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 9418254-9420253 Eutrema salsugineum
Thhalv10023930m.g 2.0kb downstream 2.0kb downstream 3339 true scaffold_8: 9420254-9423592 Eutrema salsugineum
Thhalv10023930m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 9421593-9423592 Eutrema salsugineum
Thhalv10023930m.g 5.0kb upstream 5.0kb upstream 6339 true scaffold_8: 9415254-9421592 Eutrema salsugineum
Thhalv10023930m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 9415254-9420253 Eutrema salsugineum
Thhalv10023930m.g 5.0kb downstream 5.0kb downstream 6339 true scaffold_8: 9420254-9426592 Eutrema salsugineum
Thhalv10023930m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 9421593-9426592 Eutrema salsugineum
Thhalv10023930m.g 10.0kb upstream 10.0kb upstream 11339 true scaffold_8: 9410254-9421592 Eutrema salsugineum
Thhalv10023930m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 9410254-9420253 Eutrema salsugineum
Thhalv10023930m.g 10.0kb downstream 10.0kb downstream 11339 true scaffold_8: 9420254-9431592 Eutrema salsugineum
Thhalv10023930m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 9421593-9431592 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121784219 5273 Angiosperm View MSA
122359399 5261 Brassicaceae Singleton cluster - no MSA
123797275 5264 Brassicales-Malvales Singleton cluster - no MSA
124295001 5266 SBM Singleton cluster - no MSA
124147483 5268 Malvidae Singleton cluster - no MSA
123873655 5270 Rosid Singleton cluster - no MSA
123756150 5271 Pentapetalae View MSA
122777325 5272 Eudicot View MSA
121055644 5274 Embryophyte View MSA
123095572 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain