Gene : Thhalv10003962m.g E. salsugineum v1.0
Defline:  (1 of 1) KOG1255 - Succinyl-CoA synthetase, alpha subunit Genomic Order:  529
Name:  ? Thhalv10003962m.g Secondary Identifier:  ? PAC:20199413
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5464 Eutrema salsugineum pathologic  
Esalsugineum PWY-5690 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10003962m.g 0.5kb upstream 0.5kb upstream 4160 true scaffold_6: 2019810-2023969 Eutrema salsugineum
Thhalv10003962m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 2023470-2023969 Eutrema salsugineum
Thhalv10003962m.g 0.5kb downstream 0.5kb downstream 4160 true scaffold_6: 2019310-2023469 Eutrema salsugineum
Thhalv10003962m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 2019310-2019809 Eutrema salsugineum
Thhalv10003962m.g 1.0kb upstream 1.0kb upstream 4660 true scaffold_6: 2019810-2024469 Eutrema salsugineum
Thhalv10003962m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 2023470-2024469 Eutrema salsugineum
Thhalv10003962m.g 1.0kb downstream 1.0kb downstream 4660 true scaffold_6: 2018810-2023469 Eutrema salsugineum
Thhalv10003962m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 2018810-2019809 Eutrema salsugineum
Thhalv10003962m.g 2.0kb upstream 2.0kb upstream 5660 true scaffold_6: 2019810-2025469 Eutrema salsugineum
Thhalv10003962m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 2023470-2025469 Eutrema salsugineum
Thhalv10003962m.g 2.0kb downstream 2.0kb downstream 5660 true scaffold_6: 2017810-2023469 Eutrema salsugineum
Thhalv10003962m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 2017810-2019809 Eutrema salsugineum
Thhalv10003962m.g 5.0kb upstream 5.0kb upstream 8660 true scaffold_6: 2019810-2028469 Eutrema salsugineum
Thhalv10003962m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 2023470-2028469 Eutrema salsugineum
Thhalv10003962m.g 5.0kb downstream 5.0kb downstream 8660 true scaffold_6: 2014810-2023469 Eutrema salsugineum
Thhalv10003962m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 2014810-2019809 Eutrema salsugineum
Thhalv10003962m.g 10.0kb upstream 10.0kb upstream 13660 true scaffold_6: 2019810-2033469 Eutrema salsugineum
Thhalv10003962m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 2023470-2033469 Eutrema salsugineum
Thhalv10003962m.g 10.0kb downstream 10.0kb downstream 13660 true scaffold_6: 2009810-2023469 Eutrema salsugineum
Thhalv10003962m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 2009810-2019809 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121509545 5273 Angiosperm Singleton cluster - no MSA
122358973 5261 Brassicaceae Singleton cluster - no MSA
123796884 5264 Brassicales-Malvales Singleton cluster - no MSA
124294619 5266 SBM Singleton cluster - no MSA
124147137 5268 Malvidae Singleton cluster - no MSA
123873352 5270 Rosid Singleton cluster - no MSA
123457435 5271 Pentapetalae Singleton cluster - no MSA
122492851 5272 Eudicot Singleton cluster - no MSA
120782671 5274 Embryophyte Singleton cluster - no MSA
122824715 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain