Gene : Thhalv10009717m.g E. salsugineum v1.0
Defline:  (1 of 4) PTHR22835//PTHR22835:SF189 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN Genomic Order:  601
Name:  ? Thhalv10009717m.g Secondary Identifier:  ? PAC:20187618
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-3301 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10009717m.g 0.5kb upstream 0.5kb upstream 2066 true scaffold_5: 5229871-5231936 Eutrema salsugineum
Thhalv10009717m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 5229871-5230370 Eutrema salsugineum
Thhalv10009717m.g 0.5kb downstream 0.5kb downstream 2066 true scaffold_5: 5230371-5232436 Eutrema salsugineum
Thhalv10009717m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 5231937-5232436 Eutrema salsugineum
Thhalv10009717m.g 1.0kb upstream 1.0kb upstream 2566 true scaffold_5: 5229371-5231936 Eutrema salsugineum
Thhalv10009717m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 5229371-5230370 Eutrema salsugineum
Thhalv10009717m.g 1.0kb downstream 1.0kb downstream 2566 true scaffold_5: 5230371-5232936 Eutrema salsugineum
Thhalv10009717m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 5231937-5232936 Eutrema salsugineum
Thhalv10009717m.g 2.0kb upstream 2.0kb upstream 3566 true scaffold_5: 5228371-5231936 Eutrema salsugineum
Thhalv10009717m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 5228371-5230370 Eutrema salsugineum
Thhalv10009717m.g 2.0kb downstream 2.0kb downstream 3566 true scaffold_5: 5230371-5233936 Eutrema salsugineum
Thhalv10009717m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 5231937-5233936 Eutrema salsugineum
Thhalv10009717m.g 5.0kb upstream 5.0kb upstream 6566 true scaffold_5: 5225371-5231936 Eutrema salsugineum
Thhalv10009717m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 5225371-5230370 Eutrema salsugineum
Thhalv10009717m.g 5.0kb downstream 5.0kb downstream 6566 true scaffold_5: 5230371-5236936 Eutrema salsugineum
Thhalv10009717m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 5231937-5236936 Eutrema salsugineum
Thhalv10009717m.g 10.0kb upstream 10.0kb upstream 11566 true scaffold_5: 5220371-5231936 Eutrema salsugineum
Thhalv10009717m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 5220371-5230370 Eutrema salsugineum
Thhalv10009717m.g 10.0kb downstream 10.0kb downstream 11566 true scaffold_5: 5230371-5241936 Eutrema salsugineum
Thhalv10009717m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 5231937-5241936 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122358773 5261 Brassicaceae Singleton cluster - no MSA
123796699 5264 Brassicales-Malvales Singleton cluster - no MSA
124294443 5266 SBM Singleton cluster - no MSA
124146991 5268 Malvidae Singleton cluster - no MSA
124041270 5270 Rosid View MSA
123752448 5271 Pentapetalae View MSA
122797509 5272 Eudicot View MSA
122051674 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain