Gene : Thhalv10008804m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR11387:SF15 - CYTOCHROME C OXIDASE SUBUNIT 6B-1 Genomic Order:  1099
Name:  ? Thhalv10008804m.g Secondary Identifier:  ? PAC:20187341
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-3781 Eutrema salsugineum pathologic  
Esalsugineum PWY-7279 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10008804m.g 0.5kb upstream 0.5kb upstream 2168 true scaffold_5: 7585813-7587980 Eutrema salsugineum
Thhalv10008804m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 7587481-7587980 Eutrema salsugineum
Thhalv10008804m.g 0.5kb downstream 0.5kb downstream 2168 true scaffold_5: 7585313-7587480 Eutrema salsugineum
Thhalv10008804m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 7585313-7585812 Eutrema salsugineum
Thhalv10008804m.g 1.0kb upstream 1.0kb upstream 2668 true scaffold_5: 7585813-7588480 Eutrema salsugineum
Thhalv10008804m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 7587481-7588480 Eutrema salsugineum
Thhalv10008804m.g 1.0kb downstream 1.0kb downstream 2668 true scaffold_5: 7584813-7587480 Eutrema salsugineum
Thhalv10008804m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 7584813-7585812 Eutrema salsugineum
Thhalv10008804m.g 2.0kb upstream 2.0kb upstream 3668 true scaffold_5: 7585813-7589480 Eutrema salsugineum
Thhalv10008804m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 7587481-7589480 Eutrema salsugineum
Thhalv10008804m.g 2.0kb downstream 2.0kb downstream 3668 true scaffold_5: 7583813-7587480 Eutrema salsugineum
Thhalv10008804m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 7583813-7585812 Eutrema salsugineum
Thhalv10008804m.g 5.0kb upstream 5.0kb upstream 6668 true scaffold_5: 7585813-7592480 Eutrema salsugineum
Thhalv10008804m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 7587481-7592480 Eutrema salsugineum
Thhalv10008804m.g 5.0kb downstream 5.0kb downstream 6668 true scaffold_5: 7580813-7587480 Eutrema salsugineum
Thhalv10008804m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 7580813-7585812 Eutrema salsugineum
Thhalv10008804m.g 10.0kb upstream 10.0kb upstream 11668 true scaffold_5: 7585813-7597480 Eutrema salsugineum
Thhalv10008804m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 7587481-7597480 Eutrema salsugineum
Thhalv10008804m.g 10.0kb downstream 10.0kb downstream 11668 true scaffold_5: 7575813-7587480 Eutrema salsugineum
Thhalv10008804m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 7575813-7585812 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364435 5261 Brassicaceae View MSA
123828504 5264 Brassicales-Malvales View MSA
124338868 5266 SBM View MSA
124246264 5268 Malvidae View MSA
124061307 5270 Rosid View MSA
123747314 5271 Pentapetalae View MSA
122789706 5272 Eudicot View MSA
122048408 5273 Angiosperm View MSA
121351047 5274 Embryophyte View MSA
123424784 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain