Gene : Thhalv10007822m.g E. salsugineum v1.0
Defline:  (1 of 3) 2.5.1.16 - Spermidine synthase / Putrescine aminopropyltransferase Genomic Order:  978
Name:  ? Thhalv10007822m.g Secondary Identifier:  ? PAC:20188583
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum BSUBPOLYAMSYN-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-7528 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10007822m.g 0.5kb upstream 0.5kb upstream 4248 true scaffold_5: 6967081-6971328 Eutrema salsugineum
Thhalv10007822m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 6970829-6971328 Eutrema salsugineum
Thhalv10007822m.g 0.5kb downstream 0.5kb downstream 4248 true scaffold_5: 6966581-6970828 Eutrema salsugineum
Thhalv10007822m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 6966581-6967080 Eutrema salsugineum
Thhalv10007822m.g 1.0kb upstream 1.0kb upstream 4748 true scaffold_5: 6967081-6971828 Eutrema salsugineum
Thhalv10007822m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 6970829-6971828 Eutrema salsugineum
Thhalv10007822m.g 1.0kb downstream 1.0kb downstream 4748 true scaffold_5: 6966081-6970828 Eutrema salsugineum
Thhalv10007822m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 6966081-6967080 Eutrema salsugineum
Thhalv10007822m.g 2.0kb upstream 2.0kb upstream 5748 true scaffold_5: 6967081-6972828 Eutrema salsugineum
Thhalv10007822m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 6970829-6972828 Eutrema salsugineum
Thhalv10007822m.g 2.0kb downstream 2.0kb downstream 5748 true scaffold_5: 6965081-6970828 Eutrema salsugineum
Thhalv10007822m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 6965081-6967080 Eutrema salsugineum
Thhalv10007822m.g 5.0kb upstream 5.0kb upstream 8748 true scaffold_5: 6967081-6975828 Eutrema salsugineum
Thhalv10007822m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 6970829-6975828 Eutrema salsugineum
Thhalv10007822m.g 5.0kb downstream 5.0kb downstream 8748 true scaffold_5: 6962081-6970828 Eutrema salsugineum
Thhalv10007822m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 6962081-6967080 Eutrema salsugineum
Thhalv10007822m.g 10.0kb upstream 10.0kb upstream 13748 true scaffold_5: 6967081-6980828 Eutrema salsugineum
Thhalv10007822m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 6970829-6980828 Eutrema salsugineum
Thhalv10007822m.g 10.0kb downstream 10.0kb downstream 13748 true scaffold_5: 6957081-6970828 Eutrema salsugineum
Thhalv10007822m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 6957081-6967080 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374349 5261 Brassicaceae View MSA
123837275 5264 Brassicales-Malvales View MSA
124342552 5266 SBM View MSA
124246037 5268 Malvidae View MSA
124061949 5270 Rosid View MSA
123741827 5271 Pentapetalae View MSA
122790008 5272 Eudicot View MSA
122043696 5273 Angiosperm View MSA
121346443 5274 Embryophyte View MSA
123424303 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain