Gene : Thhalv10002579m.g E. salsugineum v1.0
Defline:  (1 of 1) 5.3.1.23 - S-methyl-5-thioribose-1-phosphate isomerase / S-methyl-5-thio-D-ribose-1-phosphate aldose-ketose-isomerase Genomic Order:  37
Name:  ? Thhalv10002579m.g Secondary Identifier:  ? PAC:20196299
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-4361 Eutrema salsugineum pathologic  
Esalsugineum PWY-7270 Eutrema salsugineum pathologic  
Esalsugineum PWY-7528 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10002579m.g 0.5kb upstream 0.5kb upstream 3804 true scaffold_4: 2211553-2215356 Eutrema salsugineum
Thhalv10002579m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 2214857-2215356 Eutrema salsugineum
Thhalv10002579m.g 0.5kb downstream 0.5kb downstream 3804 true scaffold_4: 2211053-2214856 Eutrema salsugineum
Thhalv10002579m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 2211053-2211552 Eutrema salsugineum
Thhalv10002579m.g 1.0kb upstream 1.0kb upstream 4304 true scaffold_4: 2211553-2215856 Eutrema salsugineum
Thhalv10002579m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 2214857-2215856 Eutrema salsugineum
Thhalv10002579m.g 1.0kb downstream 1.0kb downstream 4304 true scaffold_4: 2210553-2214856 Eutrema salsugineum
Thhalv10002579m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 2210553-2211552 Eutrema salsugineum
Thhalv10002579m.g 2.0kb upstream 2.0kb upstream 5304 true scaffold_4: 2211553-2216856 Eutrema salsugineum
Thhalv10002579m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 2214857-2216856 Eutrema salsugineum
Thhalv10002579m.g 2.0kb downstream 2.0kb downstream 5304 true scaffold_4: 2209553-2214856 Eutrema salsugineum
Thhalv10002579m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 2209553-2211552 Eutrema salsugineum
Thhalv10002579m.g 5.0kb upstream 5.0kb upstream 8304 true scaffold_4: 2211553-2219856 Eutrema salsugineum
Thhalv10002579m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 2214857-2219856 Eutrema salsugineum
Thhalv10002579m.g 5.0kb downstream 5.0kb downstream 8304 true scaffold_4: 2206553-2214856 Eutrema salsugineum
Thhalv10002579m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 2206553-2211552 Eutrema salsugineum
Thhalv10002579m.g 10.0kb upstream 10.0kb upstream 13304 true scaffold_4: 2211553-2224856 Eutrema salsugineum
Thhalv10002579m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 2214857-2224856 Eutrema salsugineum
Thhalv10002579m.g 10.0kb downstream 10.0kb downstream 13304 true scaffold_4: 2201553-2214856 Eutrema salsugineum
Thhalv10002579m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 2201553-2211552 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360311 5261 Brassicaceae View MSA
123829438 5264 Brassicales-Malvales View MSA
124345905 5266 SBM View MSA
124238790 5268 Malvidae View MSA
124060423 5270 Rosid View MSA
123740094 5271 Pentapetalae View MSA
122788864 5272 Eudicot View MSA
122043863 5273 Angiosperm View MSA
121310201 5274 Embryophyte View MSA
123428305 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain