Gene : Thhalv10029409m.g E. salsugineum v1.0
Defline:  (1 of 3) PTHR22603:SF39 - CHOLINE KINASE 1-RELATED Genomic Order:  875
Name:  ? Thhalv10029409m.g Secondary Identifier:  ? PAC:20197985
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-3385 Eutrema salsugineum pathologic  
Esalsugineum PWY3O-450 Eutrema salsugineum pathologic  
Esalsugineum PWY4FS-6 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10029409m.g 0.5kb upstream 0.5kb upstream 3239 true scaffold_3: 8149315-8152553 Eutrema salsugineum
Thhalv10029409m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 8149315-8149814 Eutrema salsugineum
Thhalv10029409m.g 0.5kb downstream 0.5kb downstream 3239 true scaffold_3: 8149815-8153053 Eutrema salsugineum
Thhalv10029409m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 8152554-8153053 Eutrema salsugineum
Thhalv10029409m.g 1.0kb upstream 1.0kb upstream 3739 true scaffold_3: 8148815-8152553 Eutrema salsugineum
Thhalv10029409m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 8148815-8149814 Eutrema salsugineum
Thhalv10029409m.g 1.0kb downstream 1.0kb downstream 3739 true scaffold_3: 8149815-8153553 Eutrema salsugineum
Thhalv10029409m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 8152554-8153553 Eutrema salsugineum
Thhalv10029409m.g 2.0kb upstream 2.0kb upstream 4739 true scaffold_3: 8147815-8152553 Eutrema salsugineum
Thhalv10029409m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 8147815-8149814 Eutrema salsugineum
Thhalv10029409m.g 2.0kb downstream 2.0kb downstream 4739 true scaffold_3: 8149815-8154553 Eutrema salsugineum
Thhalv10029409m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 8152554-8154553 Eutrema salsugineum
Thhalv10029409m.g 5.0kb upstream 5.0kb upstream 7739 true scaffold_3: 8144815-8152553 Eutrema salsugineum
Thhalv10029409m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 8144815-8149814 Eutrema salsugineum
Thhalv10029409m.g 5.0kb downstream 5.0kb downstream 7739 true scaffold_3: 8149815-8157553 Eutrema salsugineum
Thhalv10029409m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 8152554-8157553 Eutrema salsugineum
Thhalv10029409m.g 10.0kb upstream 10.0kb upstream 12739 true scaffold_3: 8139815-8152553 Eutrema salsugineum
Thhalv10029409m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 8139815-8149814 Eutrema salsugineum
Thhalv10029409m.g 10.0kb downstream 10.0kb downstream 12739 true scaffold_3: 8149815-8162553 Eutrema salsugineum
Thhalv10029409m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 8152554-8162553 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372650 5261 Brassicaceae View MSA
123840519 5264 Brassicales-Malvales View MSA
124340711 5266 SBM View MSA
124247486 5268 Malvidae View MSA
124069180 5270 Rosid View MSA
123746925 5271 Pentapetalae View MSA
122797485 5272 Eudicot View MSA
122047896 5273 Angiosperm View MSA
121347088 5274 Embryophyte View MSA
123426626 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain