Gene : Thhalv10000962m.g E. salsugineum v1.0
Defline:  (1 of 3) PTHR10165:SF80 - LIPID PHOSPHATE PHOSPHATASE 1-RELATED Genomic Order:  416
Name:  ? Thhalv10000962m.g Secondary Identifier:  ? PAC:20202669
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum TRIGLSYN-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10000962m.g 0.5kb upstream 0.5kb upstream 2442 true scaffold_20: 2527195-2529636 Eutrema salsugineum
Thhalv10000962m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_20: 2529137-2529636 Eutrema salsugineum
Thhalv10000962m.g 0.5kb downstream 0.5kb downstream 2442 true scaffold_20: 2526695-2529136 Eutrema salsugineum
Thhalv10000962m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_20: 2526695-2527194 Eutrema salsugineum
Thhalv10000962m.g 1.0kb upstream 1.0kb upstream 2942 true scaffold_20: 2527195-2530136 Eutrema salsugineum
Thhalv10000962m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_20: 2529137-2530136 Eutrema salsugineum
Thhalv10000962m.g 1.0kb downstream 1.0kb downstream 2942 true scaffold_20: 2526195-2529136 Eutrema salsugineum
Thhalv10000962m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_20: 2526195-2527194 Eutrema salsugineum
Thhalv10000962m.g 2.0kb upstream 2.0kb upstream 3942 true scaffold_20: 2527195-2531136 Eutrema salsugineum
Thhalv10000962m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_20: 2529137-2531136 Eutrema salsugineum
Thhalv10000962m.g 2.0kb downstream 2.0kb downstream 3942 true scaffold_20: 2525195-2529136 Eutrema salsugineum
Thhalv10000962m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_20: 2525195-2527194 Eutrema salsugineum
Thhalv10000962m.g 5.0kb upstream 5.0kb upstream 6942 true scaffold_20: 2527195-2534136 Eutrema salsugineum
Thhalv10000962m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_20: 2529137-2534136 Eutrema salsugineum
Thhalv10000962m.g 5.0kb downstream 5.0kb downstream 6942 true scaffold_20: 2522195-2529136 Eutrema salsugineum
Thhalv10000962m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_20: 2522195-2527194 Eutrema salsugineum
Thhalv10000962m.g 10.0kb upstream 10.0kb upstream 11942 true scaffold_20: 2527195-2539136 Eutrema salsugineum
Thhalv10000962m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_20: 2529137-2539136 Eutrema salsugineum
Thhalv10000962m.g 10.0kb downstream 10.0kb downstream 11942 true scaffold_20: 2517195-2529136 Eutrema salsugineum
Thhalv10000962m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_20: 2517195-2527194 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379040 5261 Brassicaceae View MSA
123839517 5264 Brassicales-Malvales View MSA
124322618 5266 SBM View MSA
124248265 5268 Malvidae View MSA
124074068 5270 Rosid View MSA
123752776 5271 Pentapetalae View MSA
122787523 5272 Eudicot View MSA
122042575 5273 Angiosperm View MSA
121350600 5274 Embryophyte View MSA
123428329 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain