Gene : Thhalv10013993m.g E. salsugineum v1.0
Defline:  (1 of 4) 6.2.1.5 - Succinate--CoA ligase (ADP-forming) / Succinyl-CoA synthetase (ADP-forming) Genomic Order:  685
Name:  ? Thhalv10013993m.g Secondary Identifier:  ? PAC:20203623
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5464 Eutrema salsugineum pathologic  
Esalsugineum PWY-5690 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10013993m.g 0.5kb upstream 0.5kb upstream 2880 true scaffold_2: 2677589-2680468 Eutrema salsugineum
Thhalv10013993m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 2677589-2678088 Eutrema salsugineum
Thhalv10013993m.g 0.5kb downstream 0.5kb downstream 2880 true scaffold_2: 2678089-2680968 Eutrema salsugineum
Thhalv10013993m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 2680469-2680968 Eutrema salsugineum
Thhalv10013993m.g 1.0kb upstream 1.0kb upstream 3380 true scaffold_2: 2677089-2680468 Eutrema salsugineum
Thhalv10013993m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 2677089-2678088 Eutrema salsugineum
Thhalv10013993m.g 1.0kb downstream 1.0kb downstream 3380 true scaffold_2: 2678089-2681468 Eutrema salsugineum
Thhalv10013993m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 2680469-2681468 Eutrema salsugineum
Thhalv10013993m.g 2.0kb upstream 2.0kb upstream 4380 true scaffold_2: 2676089-2680468 Eutrema salsugineum
Thhalv10013993m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 2676089-2678088 Eutrema salsugineum
Thhalv10013993m.g 2.0kb downstream 2.0kb downstream 4380 true scaffold_2: 2678089-2682468 Eutrema salsugineum
Thhalv10013993m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 2680469-2682468 Eutrema salsugineum
Thhalv10013993m.g 5.0kb upstream 5.0kb upstream 7380 true scaffold_2: 2673089-2680468 Eutrema salsugineum
Thhalv10013993m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 2673089-2678088 Eutrema salsugineum
Thhalv10013993m.g 5.0kb downstream 5.0kb downstream 7380 true scaffold_2: 2678089-2685468 Eutrema salsugineum
Thhalv10013993m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 2680469-2685468 Eutrema salsugineum
Thhalv10013993m.g 10.0kb upstream 10.0kb upstream 12380 true scaffold_2: 2668089-2680468 Eutrema salsugineum
Thhalv10013993m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 2668089-2678088 Eutrema salsugineum
Thhalv10013993m.g 10.0kb downstream 10.0kb downstream 12380 true scaffold_2: 2678089-2690468 Eutrema salsugineum
Thhalv10013993m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 2680469-2690468 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366711 5261 Brassicaceae View MSA
123837758 5264 Brassicales-Malvales View MSA
124342253 5266 SBM View MSA
124250817 5268 Malvidae View MSA
124071271 5270 Rosid View MSA
123744798 5271 Pentapetalae View MSA
122787057 5272 Eudicot View MSA
122044805 5273 Angiosperm View MSA
121349115 5274 Embryophyte View MSA
123424705 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain