Gene : Thhalv10013929m.g E. salsugineum v1.0
Defline:  (1 of 1) 2.5.1.16//2.5.1.22 - Spermidine synthase / Putrescine aminopropyltransferase // Spermine synthase / Spermidine aminopropyltransferase Genomic Order:  2824
Name:  ? Thhalv10013929m.g Secondary Identifier:  ? PAC:20203050
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum ARGSPECAT-PWY Eutrema salsugineum pathologic  
Esalsugineum BSUBPOLYAMSYN-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-7528 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10013929m.g 0.5kb upstream 0.5kb upstream 4341 true scaffold_2: 12006796-12011136 Eutrema salsugineum
Thhalv10013929m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 12010637-12011136 Eutrema salsugineum
Thhalv10013929m.g 0.5kb downstream 0.5kb downstream 4341 true scaffold_2: 12006296-12010636 Eutrema salsugineum
Thhalv10013929m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 12006296-12006795 Eutrema salsugineum
Thhalv10013929m.g 1.0kb upstream 1.0kb upstream 4841 true scaffold_2: 12006796-12011636 Eutrema salsugineum
Thhalv10013929m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 12010637-12011636 Eutrema salsugineum
Thhalv10013929m.g 1.0kb downstream 1.0kb downstream 4841 true scaffold_2: 12005796-12010636 Eutrema salsugineum
Thhalv10013929m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 12005796-12006795 Eutrema salsugineum
Thhalv10013929m.g 2.0kb upstream 2.0kb upstream 5841 true scaffold_2: 12006796-12012636 Eutrema salsugineum
Thhalv10013929m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 12010637-12012636 Eutrema salsugineum
Thhalv10013929m.g 2.0kb downstream 2.0kb downstream 5841 true scaffold_2: 12004796-12010636 Eutrema salsugineum
Thhalv10013929m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 12004796-12006795 Eutrema salsugineum
Thhalv10013929m.g 5.0kb upstream 5.0kb upstream 8841 true scaffold_2: 12006796-12015636 Eutrema salsugineum
Thhalv10013929m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 12010637-12015636 Eutrema salsugineum
Thhalv10013929m.g 5.0kb downstream 5.0kb downstream 8841 true scaffold_2: 12001796-12010636 Eutrema salsugineum
Thhalv10013929m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 12001796-12006795 Eutrema salsugineum
Thhalv10013929m.g 10.0kb upstream 10.0kb upstream 13841 true scaffold_2: 12006796-12020636 Eutrema salsugineum
Thhalv10013929m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 12010637-12020636 Eutrema salsugineum
Thhalv10013929m.g 10.0kb downstream 10.0kb downstream 13841 true scaffold_2: 11996796-12010636 Eutrema salsugineum
Thhalv10013929m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11996796-12006795 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374357 5261 Brassicaceae View MSA
123829244 5264 Brassicales-Malvales View MSA
124341220 5266 SBM View MSA
124251479 5268 Malvidae View MSA
124062886 5270 Rosid View MSA
123739892 5271 Pentapetalae View MSA
122785821 5272 Eudicot View MSA
122045666 5273 Angiosperm View MSA
121310481 5274 Embryophyte View MSA
123347953 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain