Gene : Thhalv10011133m.g E. salsugineum v1.0
Defline:  (1 of 7) PTHR12411:SF346 - KDEL-TAILED CYSTEINE ENDOPEPTIDASE CEP1-RELATED Genomic Order:  835
Name:  ? Thhalv10011133m.g Secondary Identifier:  ? PAC:20207560
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10011133m.g 0.5kb upstream 0.5kb upstream 1917 true scaffold_16: 4251641-4253557 Eutrema salsugineum
Thhalv10011133m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_16: 4251641-4252140 Eutrema salsugineum
Thhalv10011133m.g 0.5kb downstream 0.5kb downstream 1917 true scaffold_16: 4252141-4254057 Eutrema salsugineum
Thhalv10011133m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_16: 4253558-4254057 Eutrema salsugineum
Thhalv10011133m.g 1.0kb upstream 1.0kb upstream 2417 true scaffold_16: 4251141-4253557 Eutrema salsugineum
Thhalv10011133m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_16: 4251141-4252140 Eutrema salsugineum
Thhalv10011133m.g 1.0kb downstream 1.0kb downstream 2417 true scaffold_16: 4252141-4254557 Eutrema salsugineum
Thhalv10011133m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_16: 4253558-4254557 Eutrema salsugineum
Thhalv10011133m.g 2.0kb upstream 2.0kb upstream 3417 true scaffold_16: 4250141-4253557 Eutrema salsugineum
Thhalv10011133m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_16: 4250141-4252140 Eutrema salsugineum
Thhalv10011133m.g 2.0kb downstream 2.0kb downstream 3417 true scaffold_16: 4252141-4255557 Eutrema salsugineum
Thhalv10011133m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_16: 4253558-4255557 Eutrema salsugineum
Thhalv10011133m.g 5.0kb upstream 5.0kb upstream 6417 true scaffold_16: 4247141-4253557 Eutrema salsugineum
Thhalv10011133m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_16: 4247141-4252140 Eutrema salsugineum
Thhalv10011133m.g 5.0kb downstream 5.0kb downstream 6417 true scaffold_16: 4252141-4258557 Eutrema salsugineum
Thhalv10011133m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_16: 4253558-4258557 Eutrema salsugineum
Thhalv10011133m.g 10.0kb upstream 10.0kb upstream 11417 true scaffold_16: 4242141-4253557 Eutrema salsugineum
Thhalv10011133m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_16: 4242141-4252140 Eutrema salsugineum
Thhalv10011133m.g 10.0kb downstream 10.0kb downstream 11417 true scaffold_16: 4252141-4263557 Eutrema salsugineum
Thhalv10011133m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_16: 4253558-4263557 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122357607 5261 Brassicaceae Singleton cluster - no MSA
123795639 5264 Brassicales-Malvales Singleton cluster - no MSA
124293421 5266 SBM Singleton cluster - no MSA
124146068 5268 Malvidae Singleton cluster - no MSA
124074647 5270 Rosid View MSA
123752467 5271 Pentapetalae View MSA
122797682 5272 Eudicot View MSA
122051193 5273 Angiosperm View MSA
121348840 5274 Embryophyte View MSA
123426788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain