Gene : Thhalv10010432m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR11540:SF14 - MALATE DEHYDROGENASE, CHLOROPLASTIC Genomic Order:  855
Name:  ? Thhalv10010432m.g Secondary Identifier:  ? PAC:20207364
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum GLUCONEO-PWY Eutrema salsugineum pathologic  
Esalsugineum GLYOXYLATE-BYPASS Eutrema salsugineum pathologic  
Esalsugineum PWY-5464 Eutrema salsugineum pathologic  
Esalsugineum PWY-561 Eutrema salsugineum pathologic  
Esalsugineum PWY-5690 Eutrema salsugineum pathologic  
Esalsugineum PWY66-399 Eutrema salsugineum pathologic  
Esalsugineum PWY-7115 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10010432m.g 0.5kb upstream 0.5kb upstream 2447 true scaffold_16: 4391603-4394049 Eutrema salsugineum
Thhalv10010432m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_16: 4393550-4394049 Eutrema salsugineum
Thhalv10010432m.g 0.5kb downstream 0.5kb downstream 2447 true scaffold_16: 4391103-4393549 Eutrema salsugineum
Thhalv10010432m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_16: 4391103-4391602 Eutrema salsugineum
Thhalv10010432m.g 1.0kb upstream 1.0kb upstream 2947 true scaffold_16: 4391603-4394549 Eutrema salsugineum
Thhalv10010432m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_16: 4393550-4394549 Eutrema salsugineum
Thhalv10010432m.g 1.0kb downstream 1.0kb downstream 2947 true scaffold_16: 4390603-4393549 Eutrema salsugineum
Thhalv10010432m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_16: 4390603-4391602 Eutrema salsugineum
Thhalv10010432m.g 2.0kb upstream 2.0kb upstream 3947 true scaffold_16: 4391603-4395549 Eutrema salsugineum
Thhalv10010432m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_16: 4393550-4395549 Eutrema salsugineum
Thhalv10010432m.g 2.0kb downstream 2.0kb downstream 3947 true scaffold_16: 4389603-4393549 Eutrema salsugineum
Thhalv10010432m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_16: 4389603-4391602 Eutrema salsugineum
Thhalv10010432m.g 5.0kb upstream 5.0kb upstream 6947 true scaffold_16: 4391603-4398549 Eutrema salsugineum
Thhalv10010432m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_16: 4393550-4398549 Eutrema salsugineum
Thhalv10010432m.g 5.0kb downstream 5.0kb downstream 6947 true scaffold_16: 4386603-4393549 Eutrema salsugineum
Thhalv10010432m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_16: 4386603-4391602 Eutrema salsugineum
Thhalv10010432m.g 10.0kb upstream 10.0kb upstream 11947 true scaffold_16: 4391603-4403549 Eutrema salsugineum
Thhalv10010432m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_16: 4393550-4403549 Eutrema salsugineum
Thhalv10010432m.g 10.0kb downstream 10.0kb downstream 11947 true scaffold_16: 4381603-4393549 Eutrema salsugineum
Thhalv10010432m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_16: 4381603-4391602 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367755 5261 Brassicaceae View MSA
123838139 5264 Brassicales-Malvales View MSA
124343979 5266 SBM View MSA
124242231 5268 Malvidae View MSA
124067628 5270 Rosid View MSA
123748297 5271 Pentapetalae View MSA
122785823 5272 Eudicot View MSA
122049358 5273 Angiosperm View MSA
121344647 5274 Embryophyte View MSA
123426123 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain