Gene : Thhalv10002037m.g E. salsugineum v1.0
Defline:  (1 of 2) 2.5.1.22//2.5.1.79 - Spermine synthase / Spermidine aminopropyltransferase Genomic Order:  244
Name:  ? Thhalv10002037m.g Secondary Identifier:  ? PAC:20200683
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum ARGSPECAT-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10002037m.g 0.5kb upstream 0.5kb upstream 3381 true scaffold_12: 9252693-9256073 Eutrema salsugineum
Thhalv10002037m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_12: 9255574-9256073 Eutrema salsugineum
Thhalv10002037m.g 0.5kb downstream 0.5kb downstream 3381 true scaffold_12: 9252193-9255573 Eutrema salsugineum
Thhalv10002037m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_12: 9252193-9252692 Eutrema salsugineum
Thhalv10002037m.g 1.0kb upstream 1.0kb upstream 3881 true scaffold_12: 9252693-9256573 Eutrema salsugineum
Thhalv10002037m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_12: 9255574-9256573 Eutrema salsugineum
Thhalv10002037m.g 1.0kb downstream 1.0kb downstream 3881 true scaffold_12: 9251693-9255573 Eutrema salsugineum
Thhalv10002037m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_12: 9251693-9252692 Eutrema salsugineum
Thhalv10002037m.g 2.0kb upstream 2.0kb upstream 4881 true scaffold_12: 9252693-9257573 Eutrema salsugineum
Thhalv10002037m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_12: 9255574-9257573 Eutrema salsugineum
Thhalv10002037m.g 2.0kb downstream 2.0kb downstream 4881 true scaffold_12: 9250693-9255573 Eutrema salsugineum
Thhalv10002037m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_12: 9250693-9252692 Eutrema salsugineum
Thhalv10002037m.g 5.0kb upstream 5.0kb upstream 7881 true scaffold_12: 9252693-9260573 Eutrema salsugineum
Thhalv10002037m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_12: 9255574-9260573 Eutrema salsugineum
Thhalv10002037m.g 5.0kb downstream 5.0kb downstream 7881 true scaffold_12: 9247693-9255573 Eutrema salsugineum
Thhalv10002037m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_12: 9247693-9252692 Eutrema salsugineum
Thhalv10002037m.g 10.0kb upstream 10.0kb upstream 12881 true scaffold_12: 9252693-9265573 Eutrema salsugineum
Thhalv10002037m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_12: 9255574-9265573 Eutrema salsugineum
Thhalv10002037m.g 10.0kb downstream 10.0kb downstream 12881 true scaffold_12: 9242693-9255573 Eutrema salsugineum
Thhalv10002037m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_12: 9242693-9252692 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121579732 5273 Angiosperm View MSA
122357042 5261 Brassicaceae Singleton cluster - no MSA
123795118 5264 Brassicales-Malvales Singleton cluster - no MSA
124292911 5266 SBM Singleton cluster - no MSA
124255652 5268 Malvidae View MSA
123953250 5270 Rosid View MSA
123530708 5271 Pentapetalae View MSA
122565657 5272 Eudicot View MSA
120852185 5274 Embryophyte View MSA
123426712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain