Protein Domain : IPR006822

Type:  Family Name:  Coatomer, epsilon subunit
Description:  This entry represents the epsilon subunit of the coatomer complex, which is involved in the regulation of intracellular protein trafficking between the endoplasmic reticulum and the Golgi complex [].Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. Short Name:  Coatomer_esu

0 Child Features

1 Contains

DB identifier Type Name
IPR011990 Domain Tetratricopeptide-like helical domain

3 Cross Referencess

Identifier
PTHR10805
PF04733
PIRSF016478

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0005198 IPR006822
GO:0006890 IPR006822

2 Ontology Annotations

GO Term Gene Name
GO:0005198 IPR006822
GO:0006890 IPR006822

0 Parent Features

621 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
166040 D8QYE6 PAC:15413362 Selaginella moellendorffii 283  
evm.model.supercontig_285.5 PAC:16416071 Carica papaya 296  
29776.m000487 B9SV80 PAC:16808328 Ricinus communis 289  
Cucsa.048570.1 A0A0A0KIF7 PAC:16953883 Cucumis sativus 289  
orange1.1g022777m A0A067GQF6 PAC:18138824 Citrus sinensis 292  
AT1G30630.1 Q9SA78 PAC:19653911 Arabidopsis thaliana 292  
AT2G34840.2 B3H5Z4 PAC:19641729 Arabidopsis thaliana 214  
AT2G34840.1 O64748 PAC:19641728 Arabidopsis thaliana 293  
Thhalv10017028m V4LNG8 PAC:20180328 Eutrema salsugineum 290  
Thhalv10008349m V4KR67 PAC:20187608 Eutrema salsugineum 293  
Ciclev10016127m V4UCZ1 PAC:20818296 Citrus clementina 292  
Lus10038422 PAC:23158303 Linum usitatissimum 266  
Lus10023385 PAC:23180919 Linum usitatissimum 294  
Lus10003497 PAC:23156260 Linum usitatissimum 268  
Potri.011G155800.1 B9I0V9 PAC:27003151 Populus trichocarpa 290  
Potri.001G459000.1 A0A2K2CDW7 PAC:27045552 Populus trichocarpa 154  
Gorai.005G119100.3 A0A0D2RD73 PAC:26801731 Gossypium raimondii 242  
Gorai.005G119100.2 A0A0D2SF02 PAC:26801730 Gossypium raimondii 286  
Gorai.005G119100.1 A0A0D2PRF2 PAC:26801729 Gossypium raimondii 292  
Gorai.009G116600.2 A0A0D2TI46 PAC:26762321 Gossypium raimondii 239  
Gorai.009G116600.1 A0A0D2RYY7 PAC:26762320 Gossypium raimondii 290  
27996 I0Z459 PAC:27389969 Coccomyxa subellipsoidea C-169 292  
149082 C1MJ01 PAC:27345055 Micromonas pusilla CCMP1545 296  
78935 C1DZV8 PAC:27396880 Micromonas sp RCC299 289  
30499 A4RU53 PAC:27413363 Ostreococcus lucimarinus 291  
Thecc1EG026977t1 A0A061G6V6 PAC:27437731 Theobroma cacao 197  
Thecc1EG026982t2 A0A061G8Y4 PAC:27439873 Theobroma cacao 242  
Thecc1EG026982t1 A0A061G7Q3 PAC:27439872 Theobroma cacao 293  
Migut.M01941.2.p A0A022PRV5 PAC:28949874 Mimulus guttatus 206  
Migut.M01941.1.p A0A022PTF2 PAC:28949873 Mimulus guttatus 292  

5 Publications

First Author Title Year Journal Volume Pages PubMed ID
            14690497
            15261670
            17041781
            11208122
            10469566