Protein Domain : IPR005155

Type:  Family Name:  Ribosome biogenesis factor NIP7-like
Description:  This entry represents PUA (PseudoUridine synthase and Archaeosine transglycosylase) domain containing proteins such as the ribosomal biogenesis factor NIP7 [, ]. PUA domains are predicted to bind RNA molecules with complex folded structures []. NIP7 is required for efficient 60S ribosome subunit biogenesis and has been shown to interact with another essential nucleolar protein, Nop8p, and the exosome subunit Rrp43p. These three proteins are required for 60S subunit synthesis and may be part of a dynamic complex involved in this process. Short Name:  Rbsml_synth_fac_NIP7-like

1 Child Features

DB identifier Type Name
IPR016686 Family Ribosome biogenesis factor, NIP7

2 Contains

DB identifier Type Name
IPR015947 Domain PUA-like domain
IPR002478 Domain PUA domain

1 Cross References

Identifier
PF03657

0 Found In

0 GO Annotation

0 Ontology Annotations

0 Parent Features

388 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
78465 PAC:15421474 Selaginella moellendorffii 183  
79020 PAC:15421272 Selaginella moellendorffii 183  
evm.model.supercontig_16.164 PAC:16410012 Carica papaya 264  
29726.m004028 B9RT37 PAC:16806739 Ricinus communis 187  
Cucsa.253160.1 PAC:16972043 Cucumis sativus 187  
orange1.1g029802m A0A067G876 PAC:18109697 Citrus sinensis 187  
AT4G15770.1 Q6NM52 PAC:19646427 Arabidopsis thaliana 187  
Thhalv10026330m V4MKA8 PAC:20195873 Eutrema salsugineum 187  
Ciclev10005994m V4S7H0 PAC:20791121 Citrus clementina 187  
Lus10037509 PAC:23167148 Linum usitatissimum 187  
Lus10000507 PAC:23174702 Linum usitatissimum 187  
Potri.010G024400.1 B9HSB9 PAC:26983085 Populus trichocarpa 187  
Potri.008G209600.1 A0A2K1ZKX2 PAC:27039582 Populus trichocarpa 187  
Gorai.002G028000.1 A0A0D2QZQ5 PAC:26794842 Gossypium raimondii 193  
Gorai.002G028000.2 A0A0D2QZQ5 PAC:26794844 Gossypium raimondii 193  
Gorai.002G028000.3 A0A0D2QZQ5 PAC:26794843 Gossypium raimondii 193  
35782 I0Z429 PAC:27389868 Coccomyxa subellipsoidea C-169 179  
193041 C1MM91 PAC:27347691 Micromonas pusilla CCMP1545 185  
81410 C1E6H8 PAC:27395748 Micromonas sp RCC299 185  
15555 A4RY06 PAC:27416694 Ostreococcus lucimarinus 185  
Thecc1EG021193t1 A0A061EP89 PAC:27451751 Theobroma cacao 193  
Migut.G00171.1.p A0A022RVE9 PAC:28943840 Mimulus guttatus 188  
Cagra.3418s0012.1.p PAC:28905654 Capsella grandiflora 187  
Glyma.05G031500.1.p PAC:30526989 Glycine max 187  
Glyma.17G095400.1.p PAC:30478533 Glycine max 187  
Brara.A01962.1.p A0A398AV28 PAC:30639851 Brassica rapa FPsc 187  
Brara.C04455.1.p A0A398ABD1 PAC:30618298 Brassica rapa FPsc 104  
Brara.H00822.1.p A0A397Y9B4 PAC:30649358 Brassica rapa FPsc 187  
Bostr.30275s0006.1.p PAC:30664918 Boechera stricta 187  
Cre12.g528900.t1.1 A8J593 PAC:30793507 Chlamydomonas reinhardtii 179  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            10093218
            9271378
            9891085