Protein Domain : IPR006037

Type:  Domain Name:  Regulator of K+ conductance, C-terminal
Description:  The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters.The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ].RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels).As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution.As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A).As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains.As a soluble protein consisting of a single RCK domain.This entry represents the C-terminal subdomain of RCK. Short Name:  RCK_C

0 Child Features

0 Contains

4 Cross Referencess

Identifier
PF02080
PS51202
G3DSA:3.30.70.1450
SSF116726

2 Found Ins

DB identifier Type Name
IPR016040 Domain NAD(P)-binding domain
IPR022457 Family Aspartate-alanine antiporter

2 GO Annotations

GO Term Gene Name
GO:0008324 IPR006037
GO:0006813 IPR006037

2 Ontology Annotations

GO Term Gene Name
GO:0008324 IPR006037
GO:0006813 IPR006037

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
412927 D8RMS5 PAC:15415399 Selaginella moellendorffii 660  
104898 D8RZB0 PAC:15415209 Selaginella moellendorffii 702  
60947 D8R5V5 PAC:15417127 Selaginella moellendorffii 698  
86132 D8R678 PAC:15420588 Selaginella moellendorffii 686  
evm.model.supercontig_113.52 PAC:16406064 Carica papaya 888  
evm.model.supercontig_58.22 PAC:16422992 Carica papaya 695  
evm.model.supercontig_9.383 PAC:16428294 Carica papaya 642  
29765.m000755 B9SKE2 PAC:16808223 Ricinus communis 889  
29844.m003179 B9RTF9 PAC:16810887 Ricinus communis 787  
29957.m001428 B9RVG7 PAC:16814554 Ricinus communis 887  
42033.m000025 B9TP62 PAC:16827479 Ricinus communis 142  
Cucsa.075870.1 PAC:16955784 Cucumis sativus 890  
Cucsa.076120.1 PAC:16955814 Cucumis sativus 883  
Cucsa.254830.1 PAC:16972302 Cucumis sativus 813  
Cucsa.254830.2 PAC:16972303 Cucumis sativus 804  
orange1.1g002491m A0A067DXM0 PAC:18127238 Citrus sinensis 916  
orange1.1g002475m A0A067DP62 PAC:18127237 Citrus sinensis 917  
orange1.1g004558m A0A067DKH8 PAC:18127240 Citrus sinensis 745  
orange1.1g004087m A0A067DWH1 PAC:18127239 Citrus sinensis 774  
orange1.1g004585m A0A067DK61 PAC:18127241 Citrus sinensis 744  
orange1.1g005788m A0A067DP68 PAC:18127242 Citrus sinensis 677  
orange1.1g003003m A0A067EFQ9 PAC:18117612 Citrus sinensis 858  
orange1.1g004328m A0A067EFG8 PAC:18117614 Citrus sinensis 761  
orange1.1g003021m A0A067ERT1 PAC:18117613 Citrus sinensis 856  
AT5G02940.1 Q8VZM7 PAC:19673273 Arabidopsis thaliana 813  
AT5G43745.1 Q940Y9 PAC:19668367 Arabidopsis thaliana 817  
AT5G49960.1 Q9LTX4 PAC:19669257 Arabidopsis thaliana 824  
AT3G51830.2 PAC:19658576 Arabidopsis thaliana 147  
Thhalv10003159m V4L2W1 PAC:20208075 Eutrema salsugineum 723  
Thhalv10009620m V4L1Z4 PAC:20187747 Eutrema salsugineum 235  

5 Publications

First Author Title Year Journal Volume Pages PubMed ID
            8412700
            11292341
            11301020
            12037559
            16227203