Protein Domain : IPR002867

Type:  Domain Name:  IBR domain
Description:  The IBR (In Between Ring fingers) domain is often found to occur between pairs of ring fingers. This domain has also been called the C6HC domain and DRIL (for double RING finger linked) domain []. Proteins that contain two Ring fingers and an IBR domain (these proteins are also termed RBR family proteins) are thought to exist in all eukaryotic organisms. RBR family members play roles in protein quality control and can indirectly regulate transcription []. Evidence suggests that RBR proteins are often parts of cullin-containing ubiquitin ligase complexes. The ubiquitin ligase Parkin is an RBR family protein whose mutations are involved in forms of familial Parkinson's disease [].IBR domain is a cysteine-rich (C6HC) zinc finger domain that is present in Triad1, and which is conserved in other proteins encoded by various eukaryotes. The C6HC consensus pattern is:C-x(4)-C-x(14-30)-C-x(1-4)-C-x(4)-C-x(2)-C-x(4)-H-x(4)-C The C6HC zinc finger motif is the fourth family member of the zinc-binding RING, LIM, and LAP/PHD fingers. Strikingly, in most of the proteins the C6HC domain is flanked by two RING finger structures . The novel C6HC motif has been called DRIL (double RING finger linked). The strong conservation of the larger tripartite TRIAD (twoRING fingers and DRIL) structure indicates that the three subdomains are functionally linked and identifies a novel class of proteins []. Short Name:  IBR_dom

0 Child Features

0 Contains

2 Cross Referencess

Identifier
PF01485
SM00647

1 Found In

DB identifier Type Name
IPR003977 Family E3 ubiquitin-protein ligase parkin

0 GO Annotation

0 Ontology Annotations

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
412398 D8RL13 PAC:15410944 Selaginella moellendorffii 238  
78511 D8QVL7 PAC:15422127 Selaginella moellendorffii 231  
58479 D8RNX4 PAC:15407120 Selaginella moellendorffii 196  
58478 D8RNX1 PAC:15407119 Selaginella moellendorffii 196  
415256 D8RVI6 PAC:15418811 Selaginella moellendorffii 422  
141959 D8QWX8 PAC:15413571 Selaginella moellendorffii 558  
405515 D8QYU2 PAC:15413922 Selaginella moellendorffii 485  
178621 D8SCF5 PAC:15408510 Selaginella moellendorffii 576  
432613 D8TGJ4 PAC:15404971 Selaginella moellendorffii 408  
180454 D8SK64 PAC:15413303 Selaginella moellendorffii 583  
121590 D8SNU2 PAC:15418482 Selaginella moellendorffii 557  
48392 D8SXD7 PAC:15421526 Selaginella moellendorffii 196  
evm.TU.contig_37198.1 PAC:16430999 Carica papaya 146  
evm.TU.contig_47413.1 PAC:16432409 Carica papaya 184  
evm.model.supercontig_135.38 PAC:16408277 Carica papaya 395  
evm.model.supercontig_139.61 PAC:16408562 Carica papaya 757  
evm.model.supercontig_139.63 PAC:16408564 Carica papaya 501  
evm.model.supercontig_55.67 PAC:16422635 Carica papaya 1447  
evm.model.supercontig_62.102 PAC:16423898 Carica papaya 384  
evm.model.supercontig_62.101 PAC:16423897 Carica papaya 598  
evm.model.supercontig_64.31 PAC:16424263 Carica papaya 514  
evm.model.supercontig_64.30 PAC:16424262 Carica papaya 514  
evm.model.supercontig_67.21 PAC:16424701 Carica papaya 214  
evm.model.supercontig_67.20 PAC:16424700 Carica papaya 221  
evm.model.supercontig_71.12 PAC:16425418 Carica papaya 562  
evm.model.supercontig_90.19 PAC:16428380 Carica papaya 692  
evm.model.supercontig_90.18 PAC:16428379 Carica papaya 592  
evm.model.supercontig_953.5 PAC:16428935 Carica papaya 140  
evm.model.supercontig_99.47 PAC:16429290 Carica papaya 441  
29739.m003685 B9RR33 PAC:16807464 Ricinus communis 400  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            10422847
            15152079