Protein Domain : IPR031127

Type:  Family Name:  E3 ubiquitin ligase RBR family
Description:  This family of E3 ligases has a distinctive organisation of RING fingers called 'RING-betweenRING-RING' (RBR), characterised by two RING fingers with a cysteine-rich region called the 'in-between-RING' domain that separates them [, ]. The domains in the RBR E3 ligases have been further named as RING1-BRcat-Rcat according to their structure and function: the C-terminal Rcat (required-for-catalysis) domain is essential for catalytic activity, whereas the central BRcat (benign-catalytic) domain adopts the same fold as the Rcat, but lacks a catalytic cysteine residue and ubiquitination activity []. These ligases have a unique mechanism of elongating ubiquitin chains that distinguishes them from other E3 ligases [, ].On the basis of sequence conservation within the RBR segment, RBR proteins are assigned to 15 subfamilies (A-I, P, S, T, U, X, Z). There are two RBR proteins in the yeast Saccharomyces cerevisiae, six in Drosophila melanogaster, 10 in Caenorhabditis elegans, about 40 in Arabidopsis thaliana, around 23 in the zebrafish (Danio rerio), and about 15 in humans []. One of the most studied proteins in this family is parkin, whose dysfunction is linked to the pathogenesis of early-onset Parkinson's disease []. This entry also includes HOIP (HOIL-1-interacting protein, also known as RNF31) and HOIL-1 (haem-oxidized IRP2 ubiquitin ligase 1, also known as RBCK1) [] among others. Short Name:  E3_UB_ligase_RBR

4 Child Features

DB identifier Type Name
IPR003977 Family E3 ubiquitin-protein ligase parkin
IPR031128 Family E3 ubiquitin-protein ligase RNF14
IPR031129 Family Translation termination inhibitor protein Itt1
IPR031126 Family E3 ubiquitin-protein ligase ARIH2

0 Contains

1 Cross References

Identifier
PTHR11685

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0004842 IPR031127
GO:0016567 IPR031127

2 Ontology Annotations

GO Term Gene Name
GO:0004842 IPR031127
GO:0016567 IPR031127

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
412398 D8RL13 PAC:15410944 Selaginella moellendorffii 238  
78511 D8QVL7 PAC:15422127 Selaginella moellendorffii 231  
58479 D8RNX4 PAC:15407120 Selaginella moellendorffii 196  
58478 D8RNX1 PAC:15407119 Selaginella moellendorffii 196  
415256 D8RVI6 PAC:15418811 Selaginella moellendorffii 422  
141959 D8QWX8 PAC:15413571 Selaginella moellendorffii 558  
178621 D8SCF5 PAC:15408510 Selaginella moellendorffii 576  
432613 D8TGJ4 PAC:15404971 Selaginella moellendorffii 408  
180454 D8SK64 PAC:15413303 Selaginella moellendorffii 583  
121590 D8SNU2 PAC:15418482 Selaginella moellendorffii 557  
48392 D8SXD7 PAC:15421526 Selaginella moellendorffii 196  
evm.TU.contig_37198.1 PAC:16430999 Carica papaya 146  
evm.TU.contig_47413.1 PAC:16432409 Carica papaya 184  
evm.model.supercontig_135.38 PAC:16408277 Carica papaya 395  
evm.model.supercontig_135.39 PAC:16408278 Carica papaya 790  
evm.model.supercontig_139.61 PAC:16408562 Carica papaya 757  
evm.model.supercontig_139.63 PAC:16408564 Carica papaya 501  
evm.model.supercontig_281.7 PAC:16416018 Carica papaya 44  
evm.model.supercontig_3560.1 PAC:16418256 Carica papaya 88  
evm.model.supercontig_62.102 PAC:16423898 Carica papaya 384  
evm.model.supercontig_62.101 PAC:16423897 Carica papaya 598  
evm.model.supercontig_64.31 PAC:16424263 Carica papaya 514  
evm.model.supercontig_64.33 PAC:16424265 Carica papaya 127  
evm.model.supercontig_64.30 PAC:16424262 Carica papaya 514  
evm.model.supercontig_67.21 PAC:16424701 Carica papaya 214  
evm.model.supercontig_67.20 PAC:16424700 Carica papaya 221  
evm.model.supercontig_71.12 PAC:16425418 Carica papaya 562  
evm.model.supercontig_90.19 PAC:16428380 Carica papaya 692  
evm.model.supercontig_90.18 PAC:16428379 Carica papaya 592  
evm.model.supercontig_953.5 PAC:16428935 Carica papaya 140  

8 Publications

First Author Title Year Journal Volume Pages PubMed ID
            15152079
            21532592
            24576094
            24469331
            22863777
            21694720
            19526189
            17367545