Protein Domain : IPR004855

Type:  Family Name:  Transcription factor IIA, alpha/beta subunit
Description:  Transcription factor IIA (TFIIA) is one of several factors that form part of a transcription pre-initiation complex along with RNA polymerase II, the TATA-box-binding protein (TBP) and TBP-associated factors, on the TATA-box sequence upstream of the initiation start site. After initiation, some components of the pre-initiation complex (including TFIIA) remain attached and re-initiate a subsequent round of transcription. TFIIA binds to TBP to stabilise TBP binding to the TATA element. TFIIA also inhibits the cytokine HMGB1 (high mobility group 1 protein) binding to TBP [], and can dissociate HMGB1 already bound to TBP/TATA-box.Human and Drosophila TFIIA have three subunits: two large subunits, LN/alpha and LC/beta, derived from the same gene, and a small subunit, S/gamma. Yeast TFIIA has two subunits: a large TOA1 subunit that shows sequence similarity to the N-terminal of LN/alpha and the C-terminal of LC/beta, and a small subunit, TOA2 that is highly homologous with S/gamma. The conserved regions of the large and small subunits of TFIIA combine to form two domains: a four-helix bundle (helical domain) composed of two helices from each of the N-terminal regions of TOA1 and TOA2 in yeast; and a beta-barrel (beta-barrel domain) composed of beta-sheets from the C-terminal regions of TOA1 and TOA2 [].This entry represents the precursor that yields both the alpha and beta subunits of TFIIA. The TFIIA heterotrimer is an essential general transcription initiation factor for the expression of genes transcribed by RNA polymerase II []. Short Name:  TFIIA_asu/bsu

0 Child Features

2 Contains

DB identifier Type Name
IPR013028 Domain Transcription factor IIA, alpha subunit, N-terminal
IPR009088 Domain Transcription factor IIA, beta-barrel

1 Cross References

Identifier
PTHR12694

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0006367 IPR004855
GO:0005672 IPR004855

2 Ontology Annotations

GO Term Gene Name
GO:0006367 IPR004855
GO:0005672 IPR004855

0 Parent Features

734 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
430900 D8TAW4 PAC:15401451 Selaginella moellendorffii 215  
evm.model.supercontig_81.98 PAC:16427018 Carica papaya 395  
29751.m001882 B9S3E9 PAC:16807888 Ricinus communis 383  
Cucsa.138910.1 PAC:16963303 Cucumis sativus 505  
Cucsa.138910.2 PAC:16963304 Cucumis sativus 505  
orange1.1g015442m A0A067FT64 PAC:18111314 Citrus sinensis 406  
orange1.1g016630m A0A067FTU7 PAC:18111315 Citrus sinensis 386  
orange1.1g017931m A0A067FGZ4 PAC:18111316 Citrus sinensis 363  
orange1.1g023523m A0A067FGW2 PAC:18111317 Citrus sinensis 281  
AT5G59230.1 Q9FIF4 PAC:19670470 Arabidopsis thaliana 186  
AT1G07480.2 O49349 PAC:19653635 Arabidopsis thaliana 375  
AT1G07480.1 O49349 PAC:19653634 Arabidopsis thaliana 375  
AT1G07470.1 Q93VP4 PAC:19650569 Arabidopsis thaliana 375  
Thhalv10015836m V4LRF6 PAC:20206554 Eutrema salsugineum 69  
Thhalv10007946m V4KXV2 PAC:20185956 Eutrema salsugineum 375  
Thhalv10007947m V4L1I3 PAC:20186769 Eutrema salsugineum 375  
Ciclev10028561m V4UFR3 PAC:20814391 Citrus clementina 406  
Lus10040769 PAC:23157824 Linum usitatissimum 380  
Lus10004981 PAC:23174830 Linum usitatissimum 298  
Lus10016503 PAC:23144909 Linum usitatissimum 459  
Lus10001563 PAC:23154586 Linum usitatissimum 329  
Potri.009G036700.2 PAC:26985909 Populus trichocarpa 314  
Potri.009G036700.1 A0A2K1Z282 PAC:26985908 Populus trichocarpa 409  
Potri.001G244300.1 A0A2K2C2Z8 PAC:27041668 Populus trichocarpa 137  
Potri.001G244400.1 A0A2K2C2Z6 PAC:27045899 Populus trichocarpa 220  
Gorai.001G112500.1 A0A0D2PPZ0 PAC:26824464 Gossypium raimondii 391  
Gorai.001G112500.2 A0A0D2QNV6 PAC:26824465 Gossypium raimondii 275  
Gorai.009G096500.2 A0A0D2UIZ5 PAC:26764664 Gossypium raimondii 345  
Gorai.009G096500.1 A0A0D2TGM1 PAC:26764663 Gossypium raimondii 391  
64488 I0Z712 PAC:27393483 Coccomyxa subellipsoidea C-169 258  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            12818428
            8610010
            11089979