Protein Domain : IPR002610

Type:  Family Name:  Peptidase S54, rhomboid
Description:  This group of proteins contain serine peptidases belonging to the MEROPS peptidase family S54 (Rhomboid, clan ST). They are integral membrane proteins related to the Drosophila melanogaster(Fruit fly) rhomboid protein . Members of this family are found in archaea, bacteria and eukaryotes.The D. melanogaster rhomboid protease cleaves type-1 transmembrane domains using a catalytic triad composed of serine, histidine and asparagine contributed by different transmembrane domains. It cleaves the transmembrane proteins Spitz, Gurken and Keren within their transmembrane domains to release a soluble TGFalpha-like growth factor. Cleavage occurs in the Golgi, following translocation of the substrates from the endoplasmic reticulum membrane by Star, another transmembrane protein. The growth factors are then able to activate the epidermal growth factor receptor [, ].Few substrates of mammalian rhomboid homologues have been determined, but rhomboid-like protein 2 (MEROPS S54.002) has been shown to cleave ephrin B3 []. Parasite-encoded rhomboid enzymes are also important for invasion of host cells by Toxoplasma and the malaria parasite. In Saccharomyces cerevisiae(Baker's yeast) the Pcp1 (MDM37) protein (MEROPS S54.007) is a mitochondrial endopeptidase required for the activation of cytochrome c peroxidase and for the processing of the mitochondrial dynamin-like protein Mgm1 [, ]. Mutations in Pcp1 result in cells have fragmented mitochondria, which have very few short tubulues []. Short Name:  Peptidase_S54_rhomboid

3 Child Features

DB identifier Type Name
IPR017092 Family Peptidase S54, rhomboid-like, Rom4/Rom5, apicomplexa
IPR017213 Family Peptidase S54, rhomboid, metazoan
IPR023662 Family Rhomboid protease GlpG

2 Contains

DB identifier Type Name
IPR022764 Domain Peptidase S54, rhomboid domain
IPR022732 Domain Peptidase S54, GlpG peptidase, N-terminal

1 Cross References

Identifier
PTHR22936

0 Found In

3 GO Annotations

GO Term Gene Name
GO:0004252 IPR002610
GO:0006508 IPR002610
GO:0016021 IPR002610

3 Ontology Annotations

GO Term Gene Name
GO:0004252 IPR002610
GO:0006508 IPR002610
GO:0016021 IPR002610

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
146877 D8RG62 PAC:15405015 Selaginella moellendorffii 248  
431594 D8TD56 PAC:15401536 Selaginella moellendorffii 280  
438082 D8QU07 PAC:15418180 Selaginella moellendorffii 1043  
438240 D8QV82 PAC:15419616 Selaginella moellendorffii 1043  
413432 D8RPF9 PAC:15414534 Selaginella moellendorffii 432  
98870 D8RPT3 PAC:15416758 Selaginella moellendorffii 286  
415641 D8RWS5 PAC:15421733 Selaginella moellendorffii 173  
84059 D8R4K4 PAC:15414132 Selaginella moellendorffii 335  
evm.model.supercontig_10.241 PAC:16404606 Carica papaya 312  
evm.model.supercontig_107.24 PAC:16405326 Carica papaya 322  
evm.model.supercontig_113.65 PAC:16406078 Carica papaya 117  
evm.model.supercontig_179.20 PAC:16411194 Carica papaya 421  
evm.model.supercontig_188.5 PAC:16411771 Carica papaya 365  
evm.model.supercontig_49.116 PAC:16421027 Carica papaya 207  
evm.model.supercontig_74.71 PAC:16425765 Carica papaya 336  
evm.model.supercontig_78.80 PAC:16426261 Carica papaya 304  
evm.model.supercontig_81.133 PAC:16426890 Carica papaya 396  
evm.model.supercontig_94.75 PAC:16428816 Carica papaya 340  
29794.m003452 B9RS53 PAC:16808811 Ricinus communis 308  
29841.m002838 B9RV47 PAC:16810551 Ricinus communis 303  
29908.m005957 B9RJC9 PAC:16812781 Ricinus communis 389  
30138.m003953 B9RLL6 PAC:16819319 Ricinus communis 195  
30147.m014289 B9R9E8 PAC:16820300 Ricinus communis 325  
30190.m011352 B9RC43 PAC:16823706 Ricinus communis 297  
30205.m001597 B9RSM3 PAC:16823974 Ricinus communis 429  
36002.m000024 B9TJY4 PAC:16826828 Ricinus communis 135  
27732.m000278 B9SZJ8 PAC:16799028 Ricinus communis 340  
28223.m000098 B9T4C7 PAC:16800358 Ricinus communis 408  
28698.m000049 B9T6X8 PAC:16801555 Ricinus communis 229  
28698.m000050 B9T6X9 PAC:16801556 Ricinus communis 114  

6 Publications

First Author Title Year Journal Volume Pages PubMed ID
            2110920
            11672525
            11907266
            15047175
            12417197
            12707284