Gene : LOC_Os01g42170 O. sativa v7.0
Defline:  (1 of 1) PF00077 - Retroviral aspartyl protease (RVP) Genomic Order:  2723
Name:  ? LOC_Os01g42170 Secondary Identifier:  ? PAC:33120959
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os01g42170 0.5kb upstream 0.5kb upstream 5405 true Chr1: 23903468-23908872 Oryza sativa
LOC_Os01g42170 0.5kb upstream 0.5kb upstream 500 false Chr1: 23908373-23908872 Oryza sativa
LOC_Os01g42170 0.5kb downstream 0.5kb downstream 5405 true Chr1: 23902968-23908372 Oryza sativa
LOC_Os01g42170 0.5kb downstream 0.5kb downstream 500 false Chr1: 23902968-23903467 Oryza sativa
LOC_Os01g42170 1.0kb upstream 1.0kb upstream 5905 true Chr1: 23903468-23909372 Oryza sativa
LOC_Os01g42170 1.0kb upstream 1.0kb upstream 1000 false Chr1: 23908373-23909372 Oryza sativa
LOC_Os01g42170 1.0kb downstream 1.0kb downstream 5905 true Chr1: 23902468-23908372 Oryza sativa
LOC_Os01g42170 1.0kb downstream 1.0kb downstream 1000 false Chr1: 23902468-23903467 Oryza sativa
LOC_Os01g42170 2.0kb upstream 2.0kb upstream 6905 true Chr1: 23903468-23910372 Oryza sativa
LOC_Os01g42170 2.0kb upstream 2.0kb upstream 2000 false Chr1: 23908373-23910372 Oryza sativa
LOC_Os01g42170 2.0kb downstream 2.0kb downstream 6905 true Chr1: 23901468-23908372 Oryza sativa
LOC_Os01g42170 2.0kb downstream 2.0kb downstream 2000 false Chr1: 23901468-23903467 Oryza sativa
LOC_Os01g42170 5.0kb upstream 5.0kb upstream 9905 true Chr1: 23903468-23913372 Oryza sativa
LOC_Os01g42170 5.0kb upstream 5.0kb upstream 5000 false Chr1: 23908373-23913372 Oryza sativa
LOC_Os01g42170 5.0kb downstream 5.0kb downstream 9905 true Chr1: 23898468-23908372 Oryza sativa
LOC_Os01g42170 5.0kb downstream 5.0kb downstream 5000 false Chr1: 23898468-23903467 Oryza sativa
LOC_Os01g42170 10.0kb upstream 10.0kb upstream 14905 true Chr1: 23903468-23918372 Oryza sativa
LOC_Os01g42170 10.0kb upstream 10.0kb upstream 10000 false Chr1: 23908373-23918372 Oryza sativa
LOC_Os01g42170 10.0kb downstream 10.0kb downstream 14905 true Chr1: 23893468-23908372 Oryza sativa
LOC_Os01g42170 10.0kb downstream 10.0kb downstream 10000 false Chr1: 23893468-23903467 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028362 5273 Angiosperm View MSA
124557702 5269 Grass View MSA
121297863 5274 Embryophyte View MSA
123335877 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain