Protein Domain : IPR009001

Type:  Domain Name:  Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
Description:  A beta barrel of circularly permuted topology is found in the C terminus of many translation elongation and initiation factors. This domain is found in the elongation factors EF1A (or EF-Tu) of both eukaryotes and prokaryotes, which functions to recognise and transport aminoacyl-tRNA to the acceptor (A) site of the ribosome during the elongation process [, ]. This domain is also found in the initiation factor IF2 gamma subunit of eukaryotes [], which functions to transport the initiator methionyl-tRNA to the ribosome. The C-terminal extension of mitochondrial EF1A (or EF-Tu) has structural similarities with DNA recognising zinc fingers, suggesting that the extension may be involved in recognition of RNA. Short Name:  Transl_elong_EF1A/Init_IF2_C

2 Child Features

DB identifier Type Name
IPR004160 Domain Translation elongation factor EFTu/EF1A, C-terminal
IPR015256 Domain Translation initiation factor 2, gamma subunit, C-terminal

0 Contains

1 Cross References

Identifier
SSF50465

4 Found Ins

DB identifier Type Name
IPR004541 Family Translation elongation factor EFTu/EF1A, bacterial/organelle
IPR011779 Family Sulphate adenylyltransferase, large subunit
IPR004535 Family Translation elongation factor, selenocysteine-specific
IPR022424 Family Translation initiation factor 2, gamma subunit

0 GO Annotation

0 Ontology Annotations

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
171512 D8RH56 PAC:15409631 Selaginella moellendorffii 447  
172686 D8RMF8 PAC:15413547 Selaginella moellendorffii 466  
153081 D8S6G0 PAC:15419761 Selaginella moellendorffii 397  
233481 D8S9M6 PAC:15422655 Selaginella moellendorffii 393  
115313 D8SF78 PAC:15421173 Selaginella moellendorffii 469  
230720 D8R4C2 PAC:15416134 Selaginella moellendorffii 628  
270693 D8RAR5 PAC:15421849 Selaginella moellendorffii 447  
169717 D8RAS1 PAC:15404946 Selaginella moellendorffii 447  
evm.model.supercontig_16.190 PAC:16410041 Carica papaya 464  
evm.model.supercontig_23.2 PAC:16414227 Carica papaya 571  
evm.model.supercontig_3.423 PAC:16416728 Carica papaya 250  
evm.model.supercontig_30.49 PAC:16416998 Carica papaya 478  
evm.model.supercontig_53.41 PAC:16422265 Carica papaya 447  
evm.model.supercontig_81.68 PAC:16426985 Carica papaya 433  
evm.model.supercontig_81.67 PAC:16426984 Carica papaya 138  
evm.model.supercontig_9.120 PAC:16428003 Carica papaya 402  
29703.m001548 B9SFP0 PAC:16806244 Ricinus communis 449  
29726.m003920 B9RST1 PAC:16806633 Ricinus communis 760  
29748.m000389 B9SAK6 PAC:16807784 Ricinus communis 189  
29904.m002920 B9RWF3 PAC:16812565 Ricinus communis 295  
29904.m002921 PAC:16812566 Ricinus communis 449  
29904.m002922 PAC:16812567 Ricinus communis 449  
29938.m000588 B9SPV1 PAC:16814213 Ricinus communis 348  
29938.m000590 B9SPV2 PAC:16814214 Ricinus communis 92  
29938.m000598 B9SPV9 PAC:16814221 Ricinus communis 449  
30147.m013860 B9RAT6 PAC:16819876 Ricinus communis 460  
60614.m000014 B9TLU0 PAC:16829369 Ricinus communis 295  
28408.m000204 B9T2R0 PAC:16800811 Ricinus communis 497  
28226.m000836 B9SPP6 PAC:16800371 Ricinus communis 670  
Cucsa.084920.1 A0A0A0K909 PAC:16956612 Cucumis sativus 450  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11106763
            10715211
            11927566