Protein Domain : IPR016185

Type:  Domain Name:  Pre-ATP-grasp domain
Description:  The ATP-grasp fold is one of several distinct ATP-binding folds, and is found in enzymes that catalyse the formation of amide bonds, catalysing the ATP-dependent ligation of a carboxylate-containing molecule to an amino or thiol group-containing molecule []. This fold is found in many different enzyme families, including various peptide synthetases, biotin carboxylase, synapsin, succinyl-CoA synthetase, pyruvate phosphate dikinase, and glutathione synthetase, glutathionylspermidine synthase, amongst others []. These enzymes contribute predominantly to macromolecular synthesis, using ATP-hydrolysis to activate their substrates. This entry represents the pre-ATP-grasp structural domain, which precedes the ATP-grasp domain in all superfamily members, and which usually occurs at the N terminus of the protein. The structure of the pre-ATP-grasp domain consists of alpha/beta/alpha in three layers, and is possibly a rudiment form of the Rossmann-fold. Short Name:  PreATP-grasp_dom

5 Child Features

DB identifier Type Name
IPR005481 Domain Biotin carboxylase-like, N-terminal domain
IPR020562 Domain Phosphoribosylglycinamide synthetase, N-terminal
IPR004887 Domain Glutathione synthase, substrate-binding, eukaryotic
IPR005494 Domain Glutathionylspermidine synthase, pre-ATP-grasp-like domain
IPR020897 Domain Synapsin, pre-ATP-grasp domain

0 Contains

2 Cross Referencess

Identifier
G3DSA:3.40.50.20
SSF52440

3 Found Ins

DB identifier Type Name
IPR006284 Family Glutathione synthetase, prokaryotic
IPR011870 Family Lysine biosynthesis enzyme LysX
IPR001359 Family Synapsin

0 GO Annotation

0 Ontology Annotations

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
410538 D8RF26 PAC:15406396 Selaginella moellendorffii 239  
440891 D8RF71 PAC:15408013 Selaginella moellendorffii 1194  
411783 D8RJ11 PAC:15411077 Selaginella moellendorffii 557  
411767 D8RIZ5 PAC:15411017 Selaginella moellendorffii 541  
411781 D8RJ09 PAC:15411075 Selaginella moellendorffii 438  
411779 D8RJ07 PAC:15411040 Selaginella moellendorffii 636  
438375 D8QXH7 PAC:15420474 Selaginella moellendorffii 499  
79988 D8QXW8 PAC:15406024 Selaginella moellendorffii 565  
80448 D8QY44 PAC:15405292 Selaginella moellendorffii 437  
418835 D8S6I9 PAC:15409779 Selaginella moellendorffii 181  
180525 D8SKF8 PAC:15414053 Selaginella moellendorffii 857  
121129 D8SN58 PAC:15415333 Selaginella moellendorffii 488  
121407 D8SNZ6 PAC:15417524 Selaginella moellendorffii 577  
123989 D8SSV1 PAC:15404958 Selaginella moellendorffii 280  
425362 D8SSV3 PAC:15404344 Selaginella moellendorffii 184  
183371 D8SWL6 PAC:15421200 Selaginella moellendorffii 2192  
77392 D8QRV7 PAC:15417976 Selaginella moellendorffii 747  
evm.TU.contig_34215.1 PAC:16430420 Carica papaya 430  
evm.TU.contig_37989.1 PAC:16431109 Carica papaya 79  
evm.model.supercontig_113.32 PAC:16406042 Carica papaya 537  
evm.model.supercontig_115.27 PAC:16406190 Carica papaya 506  
evm.model.supercontig_149.4 PAC:16409298 Carica papaya 150  
evm.model.supercontig_162.3 PAC:16410252 Carica papaya 525  
evm.model.supercontig_33.102 PAC:16417545 Carica papaya 629  
evm.model.supercontig_41.74 PAC:16419607 Carica papaya 128  
evm.model.supercontig_48.5 PAC:16420909 Carica papaya 718  
evm.model.supercontig_66.90 PAC:16424659 Carica papaya 1924  
evm.model.supercontig_81.16 PAC:16426919 Carica papaya 807  
29703.m001477 B9SFG9 PAC:16806173 Ricinus communis 742  
29765.m000735 B9SKC3 PAC:16808204 Ricinus communis 534  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            9416615
            12392708