Protein Domain : IPR006554

Type:  Domain Name:  Helicase-like, DEXD box c2 type
Description:  This domain of unknown function is found in the Xeroderma pigmentosum group D (XPD) proteins which belong to a family of ATP-dependent helicases characterised by a 'D-E-A-H' motif. This resembles the 'D-E-A-D-box' of other known helicases, which represents a special version of the B motif of ATP-binding proteins. In XPD,His replaces the second Asp. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre-mRNA splicing, ribosome biogenesis,nucleocytoplasmic transport, translation, RNA decay and organellar gene expression. Short Name:  Helicase-like_DEXD_c2
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0 Child Features

1 Contains

DB identifier Type Name
IPR002464 Conserved_site DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site

1 Cross References

Identifier
SM00488

2 Found Ins

DB identifier Type Name
IPR013020 Family DNA helicase (DNA repair), Rad3 type
IPR001945 Family Xeroderma pigmentosum group D protein

2 GO Annotations

GO Term Gene Name
GO:0004003 IPR006554
GO:0016818 IPR006554

2 Ontology Annotations

GO Term Gene Name
GO:0004003 IPR006554
GO:0016818 IPR006554

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
77246 D8QTS9 PAC:15417117 Selaginella moellendorffii 787  
30170.m014390 B9R8Q0 PAC:16822222 Ricinus communis 1248  
orange1.1g007505m A0A067FMZ8 PAC:18093349 Citrus sinensis 601  
orange1.1g012244m A0A067FRJ6 PAC:18093350 Citrus sinensis 467  
AT1G20750.1 F4HUN8 PAC:19656699 Arabidopsis thaliana 1144  
Thhalv10007130m V4KFS1 PAC:20188755 Eutrema salsugineum 601  
Thhalv10009302m V4KXC8 PAC:20186661 Eutrema salsugineum 1191  
Ciclev10019384m V4VVL3 PAC:20810241 Citrus clementina 601  
Lus10037548 PAC:23167217 Linum usitatissimum 766  
Potri.003G055700.1 B9GX03 PAC:26997782 Populus trichocarpa 257  
58290 I0YMC3 PAC:27394398 Coccomyxa subellipsoidea C-169 1621  
65926 C1N7A7 PAC:27348466 Micromonas pusilla CCMP1545 668  
59626 C1E971 PAC:27402139 Micromonas sp RCC299 1566  
37445 A4RVJ2 PAC:27415251 Ostreococcus lucimarinus 938  
Glyma.14G223700.17.p A0A0R0GQH4 PAC:30535121 Glycine max 1215  
Glyma.14G223700.2.p A0A0R0GQH4 PAC:30535120 Glycine max 1215  
Glyma.14G223700.5.p A0A0R0GGG1 PAC:30535116 Glycine max 1221  
Glyma.14G223700.6.p A0A0R0GGG1 PAC:30535114 Glycine max 1221  
Glyma.14G223700.10.p A0A0R0GGG1 PAC:30535115 Glycine max 1221  
Glyma.14G223700.18.p A0A0R0GGG1 PAC:30535117 Glycine max 1221  
Glyma.14G223700.3.p A0A0R0GQH4 PAC:30535118 Glycine max 1215  
Glyma.14G223700.9.p A0A0R0GQH4 PAC:30535119 Glycine max 1215  
Glyma.03G264800.1.p A0A0R0L0A8 PAC:30517244 Glycine max 267  
Bostr.7128s0665.1.p PAC:30660168 Boechera stricta 326  
Cre07.g322300.t1.1 A0A2K3DJ45 PAC:30775175 Chlamydomonas reinhardtii 1210  
SapurV1A.0016s0580.1.p PAC:31403473 Salix purpurea 1278  
SapurV1A.0016s0580.2.p PAC:31403474 Salix purpurea 1259  
evm_27.model.AmTr_v1.0_scaffold00078.196 W1PA87 PAC:31555271 Amborella trichopoda 1133  
Traes_1AL_15C1AD002.1 PAC:31924945 Triticum aestivum 700  
Traes_1AL_15C1AD002.2 PAC:31924946 Triticum aestivum 688  

0 Publications