Protein Domain : IPR000330

Type:  Domain Name:  SNF2-related, N-terminal domain
Description:  This domain is found in proteins involved in a variety of processes including transcription regulation (e.g., SNF2, STH1, brahma, MOT1), DNA repair (e.g., ERCC6, RAD16, RAD5), DNA recombination (e.g., RAD54), and chromatin unwinding (e.g., ISWI) as well as a variety of other proteins with little functional information (e.g., lodestar, ETL1) [, ]. SNF2 functions as the ATPase component of the SNF2/SWI multisubunit complex, which utilises energy derived from ATP hydrolysis to disrupt histone-DNA interactions, resulting in the increased accessibility of DNA to transcription factors.Proteins that contain this domain appear to be distantly related to the DEAX box helicases, howeverno helicase activity has ever been demonstrated for these proteins. Short Name:  SNF2_N

0 Child Features

1 Contains

DB identifier Type Name
IPR014001 Domain Helicase superfamily 1/2, ATP-binding domain

1 Cross References

Identifier
PF00176

0 Found In

1 GO Annotation

GO Term Gene Name
GO:0005524 IPR000330

1 Ontology Annotations

GO Term Gene Name
GO:0005524 IPR000330

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
441121 D8RGP3 PAC:15405477 Selaginella moellendorffii 1029  
441095 D8RGF0 PAC:15404835 Selaginella moellendorffii 1901  
186944 D8TAU2 PAC:15412286 Selaginella moellendorffii 1825  
431801 D8TDU8 PAC:15403532 Selaginella moellendorffii 412  
412612 D8RM23 PAC:15413039 Selaginella moellendorffii 1011  
438275 D8QVL3 PAC:15419705 Selaginella moellendorffii 2074  
414152 D8RRU1 PAC:15415139 Selaginella moellendorffii 338  
408 D8S3K1 PAC:15419943 Selaginella moellendorffii 835  
110695 D8S716 PAC:15409117 Selaginella moellendorffii 851  
142751 D8R1H7 PAC:15414976 Selaginella moellendorffii 420  
143427 D8R3T1 PAC:15415553 Selaginella moellendorffii 1112  
84719 D8R3G8 PAC:15419294 Selaginella moellendorffii 429  
407530 D8R5X3 PAC:15419709 Selaginella moellendorffii 814  
37666 D8QR46 PAC:15413839 Selaginella moellendorffii 174  
235696 PAC:15407665 Selaginella moellendorffii 721  
429547 D8T6J1 PAC:15417665 Selaginella moellendorffii 959  
429540 D8T6I3 PAC:15417661 Selaginella moellendorffii 1524  
403724 D8QSB5 PAC:15409509 Selaginella moellendorffii 583  
426581 D8SWU5 PAC:15408906 Selaginella moellendorffii 437  
429595 D8T6P5 PAC:15417758 Selaginella moellendorffii 1551  
evm.TU.contig_37405.1 PAC:16431029 Carica papaya 181  
evm.TU.contig_38871.1 PAC:16431257 Carica papaya 353  
evm.TU.contig_44154.1 PAC:16431969 Carica papaya 327  
evm.TU.contig_44807.2 PAC:16432089 Carica papaya 113  
evm.model.supercontig_1278.1 PAC:16407428 Carica papaya 626  
evm.model.supercontig_165.16 PAC:16410355 Carica papaya 1208  
evm.model.supercontig_182.16 PAC:16411566 Carica papaya 1471  
evm.model.supercontig_19.41 PAC:16412051 Carica papaya 1530  
evm.model.supercontig_221.20 PAC:16413960 Carica papaya 325  
evm.model.supercontig_2632.1 PAC:16415403 Carica papaya 416  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            7651832
            14729263