Protein Domain : IPR001487

Type:  Domain Name:  Bromodomain
Description:  Bromodomains are found in a variety of mammalian, invertebrate and yeast DNA-binding proteins []. Bromodomains can interact withacetylated lysine [].In some proteins, the classical bromodomain has diverged to such an extent that parts of the region are either missing or contain an insertion(e.g., mammalian protein HRX, Caenorhabditis eleganshypothetical protein ZK783.4, yeast protein YTA7). The bromodomain may occur as a single copy, or in duplicate. The precise function of the domain is unclear, but it may be involved in protein-protein interactions and may play a role in assembly or activityof multi-component complexes involved in transcriptional activation []. Short Name:  Bromodomain
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0 Child Features

1 Contains

DB identifier Type Name
IPR018359 Conserved_site Bromodomain, conserved site

6 Cross Referencess

Identifier
PF00439
PR00503
PS50014
SM00297
G3DSA:1.20.920.10
SSF47370

3 Found Ins

DB identifier Type Name
IPR017413 Family Transcription factor GTE1/GTE6
IPR016376 Family Histone acetylase PCAF
IPR011177 Family Transcription initiation factor TFIID subunit 1, animal

1 GO Annotation

GO Term Gene Name
GO:0005515 IPR001487

1 Ontology Annotations

GO Term Gene Name
GO:0005515 IPR001487

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
28941 D8S015 PAC:15411762 Selaginella moellendorffii 96  
414695 D8RTM0 PAC:15419087 Selaginella moellendorffii 200  
57616 PAC:15405645 Selaginella moellendorffii 222  
60241 D8R3Z3 PAC:15411805 Selaginella moellendorffii 1108  
83947 PAC:15417950 Selaginella moellendorffii 98  
139448 D8QQ84 PAC:15403451 Selaginella moellendorffii 519  
124067 PAC:15423276 Selaginella moellendorffii 58  
425282 D8SSL4 PAC:15403654 Selaginella moellendorffii 217  
437604 D8QNB5 PAC:15419676 Selaginella moellendorffii 255  
437976 D8QSI2 PAC:15422003 Selaginella moellendorffii 1033  
170139 PAC:15403616 Selaginella moellendorffii 864  
evm.TU.contig_39174.1 PAC:16431296 Carica papaya 506  
evm.model.supercontig_0.55 PAC:16403961 Carica papaya 554  
evm.model.supercontig_11.24 PAC:16405688 Carica papaya 1542  
evm.model.supercontig_113.46 PAC:16406057 Carica papaya 574  
evm.model.supercontig_113.47 PAC:16406058 Carica papaya 1100  
evm.model.supercontig_12.290 PAC:16406848 Carica papaya 277  
evm.model.supercontig_17.161 PAC:16410657 Carica papaya 566  
evm.model.supercontig_177.20 PAC:16411118 Carica papaya 1253  
evm.model.supercontig_189.21 PAC:16411799 Carica papaya 654  
evm.model.supercontig_19.71 PAC:16412084 Carica papaya 1018  
evm.model.supercontig_20.41 PAC:16413066 Carica papaya 275  
evm.model.supercontig_209.24 PAC:16413339 Carica papaya 653  
evm.model.supercontig_26.181 PAC:16415118 Carica papaya 749  
evm.model.supercontig_27.97 PAC:16415722 Carica papaya 384  
evm.model.supercontig_30.64 PAC:16417015 Carica papaya 388  
evm.model.supercontig_4.103 PAC:16419179 Carica papaya 374  
evm.model.supercontig_52.102 PAC:16421957 Carica papaya 570  
evm.model.supercontig_53.42 PAC:16422266 Carica papaya 398  
evm.model.supercontig_85.76 PAC:16427514 Carica papaya 686  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            7580139
            1350857
            9175470