Gene : Aco000990 A. comosus v3

Defline:  (1 of 1) PTHR32098:SF5 - LYCOPENE BETA/EPSILON CYCLASE PROTEIN Genomic Order:  988
Name:  ? Aco000990 Secondary Identifier:  ? PAC:33037356

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Acomosus CAROTENOID-PWY Ananas comosus pathologic  
Acomosus PWY-5943 Ananas comosus pathologic  
Acomosus PWY-5947 Ananas comosus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Aco000990 0.5kb upstream 0.5kb upstream 11425 true LG02: 15126587-15138011 Ananas comosus
Aco000990 0.5kb upstream 0.5kb upstream 500 false LG02: 15126587-15127086 Ananas comosus
Aco000990 0.5kb downstream 0.5kb downstream 11425 true LG02: 15127087-15138511 Ananas comosus
Aco000990 0.5kb downstream 0.5kb downstream 500 false LG02: 15138012-15138511 Ananas comosus
Aco000990 1.0kb upstream 1.0kb upstream 11925 true LG02: 15126087-15138011 Ananas comosus
Aco000990 1.0kb upstream 1.0kb upstream 1000 false LG02: 15126087-15127086 Ananas comosus
Aco000990 1.0kb downstream 1.0kb downstream 11925 true LG02: 15127087-15139011 Ananas comosus
Aco000990 1.0kb downstream 1.0kb downstream 1000 false LG02: 15138012-15139011 Ananas comosus
Aco000990 2.0kb upstream 2.0kb upstream 12925 true LG02: 15125087-15138011 Ananas comosus
Aco000990 2.0kb upstream 2.0kb upstream 2000 false LG02: 15125087-15127086 Ananas comosus
Aco000990 2.0kb downstream 2.0kb downstream 12925 true LG02: 15127087-15140011 Ananas comosus
Aco000990 2.0kb downstream 2.0kb downstream 2000 false LG02: 15138012-15140011 Ananas comosus
Aco000990 5.0kb upstream 5.0kb upstream 15925 true LG02: 15122087-15138011 Ananas comosus
Aco000990 5.0kb upstream 5.0kb upstream 5000 false LG02: 15122087-15127086 Ananas comosus
Aco000990 5.0kb downstream 5.0kb downstream 15925 true LG02: 15127087-15143011 Ananas comosus
Aco000990 5.0kb downstream 5.0kb downstream 5000 false LG02: 15138012-15143011 Ananas comosus
Aco000990 10.0kb upstream 10.0kb upstream 20925 true LG02: 15117087-15138011 Ananas comosus
Aco000990 10.0kb upstream 10.0kb upstream 10000 false LG02: 15117087-15127086 Ananas comosus
Aco000990 10.0kb downstream 10.0kb downstream 20925 true LG02: 15127087-15148011 Ananas comosus
Aco000990 10.0kb downstream 10.0kb downstream 10000 false LG02: 15138012-15148011 Ananas comosus

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042056 5273 Angiosperm View MSA
121350076 5274 Embryophyte View MSA
123425500 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain